Merge pull request #1010 from hpcugentbot/auto_update_modules_2025-09-04_15-43

boegel · web-flow · commit c5adeb13e961 · 2025-09-04T16:14:02.000+02:00
Auto Update Modules [4 September 2025, 15:43]
diff --git a/mkdocs/docs/HPC/only/gent/available_software/data/json_data.json b/mkdocs/docs/HPC/only/gent/available_software/data/json_data.json
diff --git a/mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json b/mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/Cython.md b/mkdocs/docs/HPC/only/gent/available_software/detail/Cython.md
@@ -27,5 +27,6 @@ module load Cython/3.1.2-GCCcore-14.3.0
 |Cython/3.0.10-GCCcore-13.2.0|x|x|x|x|x|x|x|
 |Cython/3.0.8-GCCcore-12.3.0|x|x|x|x|x|x|x|
 |Cython/3.0.7-GCCcore-12.3.0|x|x|x|x|x|x|x|
+|Cython/0.29.37-GCCcore-13.3.0|x|x|x|x|x|x|x|
 |Cython/0.29.37-GCCcore-12.3.0-Python-2.7.18|x|x|x|-|x|x|x|
 |Cython/0.27.3-GCCcore-12.3.0-Python-2.7.18|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/Greenlet.md b/mkdocs/docs/HPC/only/gent/available_software/detail/Greenlet.md
@@ -14,12 +14,13 @@ The overview below shows which Greenlet installations are available per HPC-UGen
 To start using Greenlet, load one of these modules using a `module load` command like:
 
 ```shell
-module load Greenlet/3.0.3-GCCcore-13.2.0
+module load Greenlet/3.1.1-GCCcore-13.3.0
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|Greenlet/3.1.1-GCCcore-13.3.0|x|x|x|x|x|x|x|
 |Greenlet/3.0.3-GCCcore-13.2.0|x|x|x|x|x|x|x|
 |Greenlet/3.0.2-GCCcore-12.3.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/Java.md b/mkdocs/docs/HPC/only/gent/available_software/detail/Java.md
@@ -14,17 +14,19 @@ The overview below shows which Java installations are available per HPC-UGent Ti
 To start using Java, load one of these modules using a `module load` command like:
 
 ```shell
-module load Java/21.0.7
+module load Java/21.0.8
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|Java/21.0.8|-|x|x|x|x|x|x|
 |Java/21.0.7|x|x|x|x|x|x|x|
 |Java/21.0.5|x|x|x|x|x|-|-|
 |Java/21.0.2|-|-|-|-|-|x|x|
-|Java/21(@Java/21.0.7)|x|x|x|x|x|x|x|
+|Java/21(@Java/21.0.8)|-|x|x|x|x|x|x|
+|Java/21(@Java/21.0.7)|x|-|-|-|-|-|-|
 |Java/17.0.15|x|x|x|x|x|x|x|
 |Java/17.0.6|x|x|x|x|x|x|x|
 |Java/17(@Java/17.0.15)|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/OSM-Express.md b/mkdocs/docs/HPC/only/gent/available_software/detail/OSM-Express.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+OSM-Express
+===========
+
+# Available modules
+
+
+The overview below shows which OSM-Express installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using OSM-Express, load one of these modules using a `module load` command like:
+
+```shell
+module load OSM-Express/0.0.5-GCCcore-13.3.0
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*
+
+| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|OSM-Express/0.0.5-GCCcore-13.3.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/Pandoc.md b/mkdocs/docs/HPC/only/gent/available_software/detail/Pandoc.md
@@ -14,12 +14,13 @@ The overview below shows which Pandoc installations are available per HPC-UGent
 To start using Pandoc, load one of these modules using a `module load` command like:
 
 ```shell
-module load Pandoc/3.1.2
+module load Pandoc/3.6.2
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|Pandoc/3.6.2|x|x|x|x|x|x|x|
 |Pandoc/3.1.2|x|x|x|x|x|x|x|
 |Pandoc/2.13|-|x|-|x|-|-|-|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/RDP.md b/mkdocs/docs/HPC/only/gent/available_software/detail/RDP.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+RDP
+===
+
+# Available modules
+
+
+The overview below shows which RDP installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using RDP, load one of these modules using a `module load` command like:
+
+```shell
+module load RDP/0.13.5-GCCcore-13.3.0
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*
+
+| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|RDP/0.13.5-GCCcore-13.3.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/Rust.md b/mkdocs/docs/HPC/only/gent/available_software/detail/Rust.md
@@ -25,6 +25,7 @@ module load Rust/1.88.0-GCCcore-14.3.0
 |Rust/1.86.0-GCCcore-13.3.0|x|x|x|x|x|x|x|
 |Rust/1.86.0-GCCcore-13.2.0-nightly|x|x|x|x|x|x|x|
 |Rust/1.85.1-GCCcore-14.2.0|x|x|x|x|x|x|x|
+|Rust/1.81.0-GCCcore-13.3.0|x|x|x|x|x|x|x|
 |Rust/1.78.0-GCCcore-13.3.0|x|x|x|x|x|x|x|
 |Rust/1.76.0-GCCcore-13.2.0|x|x|x|x|x|x|x|
 |Rust/1.75.0-GCCcore-12.3.0-nightly|-|x|-|-|-|-|-|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/SQLAlchemy.md b/mkdocs/docs/HPC/only/gent/available_software/detail/SQLAlchemy.md
@@ -14,12 +14,13 @@ The overview below shows which SQLAlchemy installations are available per HPC-UG
 To start using SQLAlchemy, load one of these modules using a `module load` command like:
 
 ```shell
-module load SQLAlchemy/2.0.29-GCCcore-13.2.0
+module load SQLAlchemy/2.0.36-GCCcore-13.3.0
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|SQLAlchemy/2.0.36-GCCcore-13.3.0|x|x|x|x|x|x|x|
 |SQLAlchemy/2.0.29-GCCcore-13.2.0|x|x|x|x|x|x|x|
 |SQLAlchemy/2.0.25-GCCcore-12.3.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/boto3.md b/mkdocs/docs/HPC/only/gent/available_software/detail/boto3.md
@@ -22,4 +22,5 @@ module load boto3/1.36.16-GCCcore-13.2.0
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
 |boto3/1.36.16-GCCcore-13.2.0|x|x|x|x|x|x|x|
+|boto3/1.35.36-GCCcore-13.3.0|x|x|x|x|x|x|x|
 |boto3/1.28.70-GCCcore-12.3.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/code-cli.md b/mkdocs/docs/HPC/only/gent/available_software/detail/code-cli.md
@@ -14,11 +14,12 @@ The overview below shows which code-cli installations are available per HPC-UGen
 To start using code-cli, load one of these modules using a `module load` command like:
 
 ```shell
-module load code-cli/1.93.1-x64
+module load code-cli/1.103.2
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|code-cli/1.103.2|x|x|x|x|x|x|x|
 |code-cli/1.93.1-x64|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/code-server.md b/mkdocs/docs/HPC/only/gent/available_software/detail/code-server.md
@@ -14,11 +14,12 @@ The overview below shows which code-server installations are available per HPC-U
 To start using code-server, load one of these modules using a `module load` command like:
 
 ```shell
-module load code-server/4.93.1
+module load code-server/4.103.2
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|code-server/4.103.2|x|x|x|x|x|x|x|
 |code-server/4.93.1|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/geopandas.md b/mkdocs/docs/HPC/only/gent/available_software/detail/geopandas.md
@@ -14,11 +14,12 @@ The overview below shows which geopandas installations are available per HPC-UGe
 To start using geopandas, load one of these modules using a `module load` command like:
 
 ```shell
-module load geopandas/0.14.2-foss-2023a
+module load geopandas/1.0.1-foss-2024a
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|geopandas/1.0.1-foss-2024a|x|x|x|x|x|x|x|
 |geopandas/0.14.2-foss-2023a|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/libosmium.md b/mkdocs/docs/HPC/only/gent/available_software/detail/libosmium.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+libosmium
+=========
+
+# Available modules
+
+
+The overview below shows which libosmium installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using libosmium, load one of these modules using a `module load` command like:
+
+```shell
+module load libosmium/2.22.0-foss-2024a
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*
+
+| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|libosmium/2.22.0-foss-2024a|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/osmium-tool.md b/mkdocs/docs/HPC/only/gent/available_software/detail/osmium-tool.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+osmium-tool
+===========
+
+# Available modules
+
+
+The overview below shows which osmium-tool installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using osmium-tool, load one of these modules using a `module load` command like:
+
+```shell
+module load osmium-tool/1.18.0-foss-2024a
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*
+
+| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|osmium-tool/1.18.0-foss-2024a|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/pkgconfig.md b/mkdocs/docs/HPC/only/gent/available_software/detail/pkgconfig.md
@@ -14,13 +14,14 @@ The overview below shows which pkgconfig installations are available per HPC-UGe
 To start using pkgconfig, load one of these modules using a `module load` command like:
 
 ```shell
-module load pkgconfig/1.5.5-GCCcore-13.2.0-python
+module load pkgconfig/1.5.5-GCCcore-13.3.0-python
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|pkgconfig/1.5.5-GCCcore-13.3.0-python|x|x|x|x|x|x|x|
 |pkgconfig/1.5.5-GCCcore-13.2.0-python|x|x|x|x|x|x|x|
 |pkgconfig/1.5.5-GCCcore-12.3.0-python|x|x|x|x|x|x|x|
 |pkgconfig/1.5.5-GCCcore-12.2.0-python|-|-|-|-|-|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/protozero.md b/mkdocs/docs/HPC/only/gent/available_software/detail/protozero.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+protozero
+=========
+
+# Available modules
+
+
+The overview below shows which protozero installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using protozero, load one of these modules using a `module load` command like:
+
+```shell
+module load protozero/1.8.1-GCCcore-13.3.0
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*
+
+| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|protozero/1.8.1-GCCcore-13.3.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/psycopg.md b/mkdocs/docs/HPC/only/gent/available_software/detail/psycopg.md
@@ -14,12 +14,13 @@ The overview below shows which psycopg installations are available per HPC-UGent
 To start using psycopg, load one of these modules using a `module load` command like:
 
 ```shell
-module load psycopg/3.2.1-GCCcore-12.3.0
+module load psycopg/3.2.3-GCCcore-13.3.0
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|psycopg/3.2.3-GCCcore-13.3.0|x|x|x|x|x|x|x|
 |psycopg/3.2.1-GCCcore-12.3.0|-|x|x|x|x|x|x|
 |psycopg/3.1.18-GCCcore-13.2.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/pyrosm.md b/mkdocs/docs/HPC/only/gent/available_software/detail/pyrosm.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+pyrosm
+======
+
+# Available modules
+
+
+The overview below shows which pyrosm installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using pyrosm, load one of these modules using a `module load` command like:
+
+```shell
+module load pyrosm/0.6.2-foss-2024a
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*
+
+| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|pyrosm/0.6.2-foss-2024a|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/r5py.md b/mkdocs/docs/HPC/only/gent/available_software/detail/r5py.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+r5py
+====
+
+# Available modules
+
+
+The overview below shows which r5py installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using r5py, load one of these modules using a `module load` command like:
+
+```shell
+module load r5py/1.0.6-foss-2024a-Java-21
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*
+
+| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|r5py/1.0.6-foss-2024a-Java-21|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/rasterio.md b/mkdocs/docs/HPC/only/gent/available_software/detail/rasterio.md
@@ -14,11 +14,12 @@ The overview below shows which rasterio installations are available per HPC-UGen
 To start using rasterio, load one of these modules using a `module load` command like:
 
 ```shell
-module load rasterio/1.3.9-foss-2023a
+module load rasterio/1.4.3-foss-2024a
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|rasterio/1.4.3-foss-2024a|x|x|x|x|x|x|x|
 |rasterio/1.3.9-foss-2023a|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/simplification.md b/mkdocs/docs/HPC/only/gent/available_software/detail/simplification.md
@@ -0,0 +1,24 @@
+---
+hide:
+  - toc
+---
+
+simplification
+==============
+
+# Available modules
+
+
+The overview below shows which simplification installations are available per HPC-UGent Tier-2 cluster, ordered based on software version (new to old).
+
+To start using simplification, load one of these modules using a `module load` command like:
+
+```shell
+module load simplification/0.7.12-gfbf-2024a
+```
+
+*(This data was automatically generated on {{modules_last_updated}})*
+
+| |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
+| :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|simplification/0.7.12-gfbf-2024a|x|x|x|x|x|x|x|
diff --git a/mkdocs/extra/gent.yml b/mkdocs/extra/gent.yml
@@ -16,7 +16,7 @@ hpcname: hpcugent
 loginnode: login.hpc.ugent.be
 loginhost: gligar09.gastly.os
 altloginhost: gligar10.gastly.os
-modules_last_updated: Tue, 02 Sep 2025 at 15:46:02 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
+modules_last_updated: Thu, 04 Sep 2025 at 15:46:21 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
 # get these with ssh-keyscan gligar01.ugent.be > file
 # ssh-keygen -l -f file
 # ssh-keygen -l -f file -E md5
