Update Modules [6 May 2025, 15:43]

admin6 · admin6 · commit 4e50c3b753d6 · 2025-05-06T15:45:37.000+02:00
diff --git a/mkdocs/docs/HPC/only/gent/available_software/data/json_data.json b/mkdocs/docs/HPC/only/gent/available_software/data/json_data.json
diff --git a/mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json b/mkdocs/docs/HPC/only/gent/available_software/data/json_data_detail.json
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/ABAQUS.md b/mkdocs/docs/HPC/only/gent/available_software/detail/ABAQUS.md
@@ -22,5 +22,6 @@ module load ABAQUS/2024-hotfix-2405
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
 |ABAQUS/2024-hotfix-2405|x|x|x|x|x|x|x|
+|ABAQUS/2023|-|x|-|x|-|x|x|
 |ABAQUS/2022-hotfix-2214|x|x|x|x|x|x|x|
 |ABAQUS/2022|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/Bowtie.md b/mkdocs/docs/HPC/only/gent/available_software/detail/Bowtie.md
@@ -14,11 +14,12 @@ The overview below shows which Bowtie installations are available per HPC-UGent
 To start using Bowtie, load one of these modules using a `module load` command like:
 
 ```shell
-module load Bowtie/1.3.1-GCC-12.3.0
+module load Bowtie/1.3.1-GCC-13.3.0
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*  
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|Bowtie/1.3.1-GCC-13.3.0|x|x|x|x|-|x|x|
 |Bowtie/1.3.1-GCC-12.3.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/Bowtie2.md b/mkdocs/docs/HPC/only/gent/available_software/detail/Bowtie2.md
@@ -14,13 +14,14 @@ The overview below shows which Bowtie2 installations are available per HPC-UGent
 To start using Bowtie2, load one of these modules using a `module load` command like:
 
 ```shell
-module load Bowtie2/2.5.4-GCC-13.2.0
+module load Bowtie2/2.5.4-GCC-13.3.0
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*  
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|Bowtie2/2.5.4-GCC-13.3.0|x|x|x|x|-|x|x|
 |Bowtie2/2.5.4-GCC-13.2.0|x|x|x|x|x|x|x|
 |Bowtie2/2.5.4-GCC-12.3.0-Python-2.7.18|x|x|x|x|x|x|x|
 |Bowtie2/2.5.1-GCC-12.3.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/HISAT2.md b/mkdocs/docs/HPC/only/gent/available_software/detail/HISAT2.md
@@ -14,11 +14,12 @@ The overview below shows which HISAT2 installations are available per HPC-UGent
 To start using HISAT2, load one of these modules using a `module load` command like:
 
 ```shell
-module load HISAT2/2.2.1-gompi-2023a
+module load HISAT2/2.2.1-gompi-2024a
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*  
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|HISAT2/2.2.1-gompi-2024a|x|x|x|x|-|x|x|
 |HISAT2/2.2.1-gompi-2023a|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/Jellyfish.md b/mkdocs/docs/HPC/only/gent/available_software/detail/Jellyfish.md
@@ -14,11 +14,12 @@ The overview below shows which Jellyfish installations are available per HPC-UGe
 To start using Jellyfish, load one of these modules using a `module load` command like:
 
 ```shell
-module load Jellyfish/2.3.1-GCC-12.3.0
+module load Jellyfish/2.3.1-GCC-13.3.0
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*  
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|Jellyfish/2.3.1-GCC-13.3.0|x|x|x|x|-|x|x|
 |Jellyfish/2.3.1-GCC-12.3.0|-|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/RSEM.md b/mkdocs/docs/HPC/only/gent/available_software/detail/RSEM.md
@@ -14,11 +14,12 @@ The overview below shows which RSEM installations are available per HPC-UGent Ti
 To start using RSEM, load one of these modules using a `module load` command like:
 
 ```shell
-module load RSEM/1.3.3-foss-2023a
+module load RSEM/1.3.3-foss-2024a
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*  
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|RSEM/1.3.3-foss-2024a|x|x|x|x|-|x|x|
 |RSEM/1.3.3-foss-2023a|-|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/STAR.md b/mkdocs/docs/HPC/only/gent/available_software/detail/STAR.md
@@ -22,6 +22,7 @@ module load STAR/2.7.11b_alpha_2024-02-09-GCC-12.3.0
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
 |STAR/2.7.11b_alpha_2024-02-09-GCC-12.3.0|-|x|x|x|x|x|x|
+|STAR/2.7.11b-GCC-13.3.0|x|x|x|x|-|x|x|
 |STAR/2.7.11b-GCC-13.2.0|-|x|x|x|x|x|x|
 |STAR/2.7.11b-GCC-12.3.0|-|x|x|x|x|-|-|
 |STAR/2.7.11a-GCC-12.3.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/Salmon.md b/mkdocs/docs/HPC/only/gent/available_software/detail/Salmon.md
@@ -14,11 +14,12 @@ The overview below shows which Salmon installations are available per HPC-UGent
 To start using Salmon, load one of these modules using a `module load` command like:
 
 ```shell
-module load Salmon/1.10.3-GCC-12.3.0
+module load Salmon/1.10.3-GCC-13.3.0
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*  
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|Salmon/1.10.3-GCC-13.3.0|x|x|x|x|-|x|x|
 |Salmon/1.10.3-GCC-12.3.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/jemalloc.md b/mkdocs/docs/HPC/only/gent/available_software/detail/jemalloc.md
@@ -21,5 +21,5 @@ module load jemalloc/5.3.0-GCCcore-13.3.0
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
-|jemalloc/5.3.0-GCCcore-13.3.0|-|x|x|x|x|x|x|
+|jemalloc/5.3.0-GCCcore-13.3.0|x|x|x|x|x|x|x|
 |jemalloc/5.3.0-GCCcore-12.3.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/kallisto.md b/mkdocs/docs/HPC/only/gent/available_software/detail/kallisto.md
@@ -14,11 +14,12 @@ The overview below shows which kallisto installations are available per HPC-UGen
 To start using kallisto, load one of these modules using a `module load` command like:
 
 ```shell
-module load kallisto/0.51.1-gompi-2023a
+module load kallisto/0.51.1-gompi-2024a
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*  
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|kallisto/0.51.1-gompi-2024a|x|x|x|x|-|x|x|
 |kallisto/0.51.1-gompi-2023a|-|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/tbb.md b/mkdocs/docs/HPC/only/gent/available_software/detail/tbb.md
@@ -14,13 +14,14 @@ The overview below shows which tbb installations are available per HPC-UGent Tie
 To start using tbb, load one of these modules using a `module load` command like:
 
 ```shell
-module load tbb/2021.13.0-GCCcore-13.2.0
+module load tbb/2021.13.0-GCCcore-13.3.0
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*  
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|tbb/2021.13.0-GCCcore-13.3.0|x|x|x|x|-|x|x|
 |tbb/2021.13.0-GCCcore-13.2.0|-|x|x|x|x|x|x|
 |tbb/2021.11.0-GCCcore-12.3.0|x|x|x|x|x|x|x|
 |tbb/2020.1-GCCcore-12.3.0|-|x|x|x|x|x|x|
diff --git a/mkdocs/docs/HPC/only/gent/available_software/detail/xxd.md b/mkdocs/docs/HPC/only/gent/available_software/detail/xxd.md
@@ -14,12 +14,13 @@ The overview below shows which xxd installations are available per HPC-UGent Tie
 To start using xxd, load one of these modules using a `module load` command like:
 
 ```shell
-module load xxd/9.1.0307-GCCcore-13.2.0
+module load xxd/9.1.1275-GCCcore-13.3.0
 ```
 
 *(This data was automatically generated on {{modules_last_updated}})*  
 
 | |accelgor|doduo|donphan|gallade|joltik|litleo|shinx|
 | :---: | :---: | :---: | :---: | :---: | :---: | :---: | :---: |
+|xxd/9.1.1275-GCCcore-13.3.0|x|x|x|x|-|x|x|
 |xxd/9.1.0307-GCCcore-13.2.0|x|x|x|x|x|x|x|
 |xxd/9.0.2112-GCCcore-12.3.0|x|x|x|x|x|x|x|
diff --git a/mkdocs/extra/gent.yml b/mkdocs/extra/gent.yml
@@ -16,7 +16,7 @@ hpcname: hpcugent
 loginnode: login.hpc.ugent.be
 loginhost: gligar09.gastly.os
 altloginhost: gligar10.gastly.os
-modules_last_updated: Thu, 24 Apr 2025 at 15:45:37 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
+modules_last_updated: Tue, 06 May 2025 at 15:45:36 CEST # This line is automatically updated by scripts/available_modules/available_modules.py
 # get these with ssh-keyscan gligar01.ugent.be > file
 # ssh-keygen -l -f file
 # ssh-keygen -l -f file -E md5
