cran-comments.md

Test environments

• local R installation, R 4.0.2
• ubuntu 16.04 (on travis-ci), R 4.0.2
• win-builder (devel)

R CMD check results

0 errors | 0 warnings | 1 note

• This is a new release, addressing some minor bug fixes and adding some more functionality.

plinkQC 0.3.3

major changes

• Output all IBD estimates in run_check_relatedness not just fail IBD estimates d009da90
• Add midp modifier for --hwe and --hardy as recommended on plink hwe documentation and discussed in issue #27; 43230a6c

minor changes

• Add checks in cleanData that can distinguish between miss-sepcified filters and non-failing samples 7432b1ee; addresses issue #31
• Add checks and tests in check_snp_missingness, check_maf and check_hwe in cases where all samples pass perIndividualQC. 31ed6f65; related to issue #31
• Add checks and tests in evaluate_check_sex and evaluate_check_het_imiss for all passing samples and accordingly, no fail samples label in plot. d071a43
• Update dropbox links and add note to vignette 9bae988