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1 | | -#Hypergraph Toolbox: HyperG |
| 1 | +# Hypergraph Toolbox: HyperG |
2 | 2 | **HyperG** is a python toolbox for hypergraph-based deep learning, which is built upon [pytorch](https://pytorch.org/). |
3 | 3 | Edge in hypergraph named hyperedge can link more than two nodes, which allows hyperedge to express more than pair-wise |
4 | 4 | relation(like: entity-attribute relation, group relation, hierarchical relation and so on.). Thus, hypergraph owns more |
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21 | 21 | * **Hypergraph Convolution**: the common hyconv(hypergrpah convolution) ([Feng et al. AAAI2019](https://github.com/iMoonLab/HGNN)) |
22 | 22 | is implemented here. |
23 | 23 |
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24 | | - * **models**: HGNN([Feng et al. AAAI2019](https://github.com/iMoonLab/HGNN)) with two hyconv layers, ResNet(18, 34, 50, 101, 152) |
| 24 | + * **Models**: HGNN([Feng et al. AAAI2019](https://github.com/iMoonLab/HGNN)) with two hyconv layers, ResNet(18, 34, 50, 101, 152) |
25 | 25 | ([He et al.](https://arxiv.org/abs/1512.03385)), and ResNet_HGNN a combination of ResNet and HGNN for image input and real-time |
26 | 26 | construct hypergraph supported. |
27 | 27 |
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28 | | - * **utils**: some convenient util functions(to be continue... ): |
29 | | - * **data**: multiple modality data supported (to be continue...) |
30 | | - * **mri**: mri series read and write functions. |
31 | | - * **pathology**: sample patches from WSI slide return patch coordinates(left top point) and patch width and height. |
| 28 | + * **Utils**: some convenient util functions(to be continue... ): |
| 29 | + * **Data**: multiple modality data supported (to be continue...) |
| 30 | + * **MRI**: mri series read and write functions. |
| 31 | + * **Pathology**: sample patches from WSI slide return patch coordinates(left top point) and patch width and height. |
32 | 32 | draw sampled patches on WSI slide function for overview or visualization. |
33 | | - * **meter**: evaluate meters in hypergraph learning. |
34 | | - * **inductive**: *C-Index Meter* for survival prediction. |
35 | | - * **transductive**: compute class accuracy in classification task for transductive learning, compute IOU Score for |
| 33 | + * **Meter**: evaluate meters in hypergraph learning. |
| 34 | + * **Inductive**: *C-Index Meter* for survival prediction. |
| 35 | + * **Transductive**: compute class accuracy in classification task for transductive learning, compute IOU Score for |
36 | 36 | segmentation task in transductive learning. |
37 | | - * **visualization**: some visualization functions. |
38 | | - * **transductive**: visualize segmentation result in transductive learning. |
| 37 | + * **Visualization**: some visualization functions. |
| 38 | + * **Transductive**: visualize segmentation result in transductive learning. |
39 | 39 |
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40 | 40 |
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41 | 41 | ## Installation |
@@ -66,4 +66,4 @@ If you find **HyperG** is useful in your research, please consider citing: |
66 | 66 |
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67 | 67 | ## Contributing |
68 | 68 | We always welcome contributions to help make HyperG better, and apply hypergraph in more application. If you would like |
69 | | -to contribute, please contact [us ](mailto:[email protected]). |
| 69 | +to contribute, please [contact us ](mailto:[email protected]). |
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