Built site for gh-pages

Author: kevinrue

.nojekyll

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-6344c528
+371539de

apps.html

@@ -166,7 +166,8 @@
     <h2 id="toc-title">On this page</h2>
 
   <ul>
-  <li><a href="#rigby-et-al.-biorxiv-2023" id="toc-rigby-et-al.-biorxiv-2023" class="nav-link active" data-scroll-target="#rigby-et-al.-biorxiv-2023">Rigby et al., bioRxiv, 2023</a></li>
+  <li><a href="#john-et-al-biorxiv-2025" id="toc-john-et-al-biorxiv-2025" class="nav-link active" data-scroll-target="#john-et-al-biorxiv-2025">John et al, bioRxiv, 2025</a></li>
+  <li><a href="#rigby-et-al.-biorxiv-2023" id="toc-rigby-et-al.-biorxiv-2023" class="nav-link" data-scroll-target="#rigby-et-al.-biorxiv-2023">Rigby et al., bioRxiv, 2023</a></li>
   <li><a href="#fgcz-fancy-single-cell-explorer" id="toc-fgcz-fancy-single-cell-explorer" class="nav-link" data-scroll-target="#fgcz-fancy-single-cell-explorer">FGCZ Fancy Single Cell Explorer</a></li>
   <li><a href="#moffitt-et-al.-science-2018" id="toc-moffitt-et-al.-science-2018" class="nav-link" data-scroll-target="#moffitt-et-al.-science-2018">Moffitt et al., Science, 2018</a></li>
   <li><a href="#petukhov-et-al.-nat-biotech-2021" id="toc-petukhov-et-al.-nat-biotech-2021" class="nav-link" data-scroll-target="#petukhov-et-al.-nat-biotech-2021">Petukhov et al., Nat Biotech, 2021</a></li>
@@ -208,6 +209,19 @@ <h1 class="title">Apps</h1>
 
 <p>This page lists known public deployments of <a href="https://bioconductor.org/packages/iSEE/">iSEE</a> apps.</p>
 <p>Links are ordered in reverse order of <a href="https://bioconductor.org/packages/iSEE/">iSEE</a> package version (i.e., those using the most recent version appear first).</p>
+<section id="john-et-al-biorxiv-2025" class="level2">
+<h2 class="anchored" data-anchor-id="john-et-al-biorxiv-2025">John et al, bioRxiv, 2025</h2>
+<div class="quarto-figure quarto-figure-center">
+<figure class="figure">
+<p><img src="images/apps/john_et_al.png" class="img-fluid figure-img"></p>
+<figcaption class="figure-caption">John et al, bioRxiv, 2025.</figcaption>
+</figure>
+</div>
+<p><i class="fa-solid fa-arrow-pointer" aria-label="arrow-pointer"></i> Shiny app <a href="https://shiny.mpl.mpg.de/wehner_lab/spinal_cord_regeneration_atlas/" class="uri">https://shiny.mpl.mpg.de/wehner_lab/spinal_cord_regeneration_atlas/</a></p>
+<p><i class="fa-solid fa-user" aria-label="user"></i> Authored by <a href="https://mpl.mpg.de/research-at-mpl/independent-research-groups/wehner-research-group">Wehner group</a></p>
+<p><i class="fa-solid fa-cog" aria-label="cog"></i> Using <strong>iSEE</strong> {2.18.0}, <strong>iSEEhex</strong> {1.8.0}, <strong>iSEEu</strong> {1.18.0}</p>
+<p><strong>More:</strong> This app accompanies the preprint “Biphasic inflammation control by dedifferentiated fibroblasts enables axon regeneration after spinal cord injury in zebrafish” <a href="https://www.biorxiv.org/content/10.1101/2025.01.27.635043v1" class="uri">https://www.biorxiv.org/content/10.1101/2025.01.27.635043v1</a>.</p>
+</section>
 <section id="rigby-et-al.-biorxiv-2023" class="level2">
 <h2 class="anchored" data-anchor-id="rigby-et-al.-biorxiv-2023">Rigby et al., bioRxiv, 2023</h2>
 <div class="quarto-figure quarto-figure-center">

search.json

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     "text": "This page lists known public deployments of iSEE apps.\nLinks are ordered in reverse order of iSEE package version (i.e., those using the most recent version appear first)."
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+  {
+    "objectID": "apps.html#john-et-al-biorxiv-2025",
+    "href": "apps.html#john-et-al-biorxiv-2025",
+    "title": "Apps",
+    "section": "John et al, bioRxiv, 2025",
+    "text": "John et al, bioRxiv, 2025\n\n\n\nJohn et al, bioRxiv, 2025.\n\n\n Shiny app https://shiny.mpl.mpg.de/wehner_lab/spinal_cord_regeneration_atlas/\n Authored by Wehner group\n Using iSEE {2.18.0}, iSEEhex {1.8.0}, iSEEu {1.18.0}\nMore: This app accompanies the preprint “Biphasic inflammation control by dedifferentiated fibroblasts enables axon regeneration after spinal cord injury in zebrafish” https://www.biorxiv.org/content/10.1101/2025.01.27.635043v1."
+  },
   {
     "objectID": "apps.html#rigby-et-al.-biorxiv-2023",
     "href": "apps.html#rigby-et-al.-biorxiv-2023",

sitemap.xml

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   <url>
     <loc>https://isee.github.io/videos.html</loc>
-    <lastmod>2025-02-06T10:23:40.921Z</lastmod>
+    <lastmod>2025-02-06T10:25:07.754Z</lastmod>
   </url>
   <url>
     <loc>https://isee.github.io/history.html</loc>
-    <lastmod>2025-02-06T10:23:39.351Z</lastmod>
+    <lastmod>2025-02-06T10:25:06.496Z</lastmod>
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   <url>
     <loc>https://isee.github.io/apps.html</loc>
-    <lastmod>2025-02-06T10:23:36.881Z</lastmod>
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   </url>
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     <loc>https://isee.github.io/contribute.html</loc>
-    <lastmod>2025-02-06T10:23:34.626Z</lastmod>
+    <lastmod>2025-02-06T10:25:02.135Z</lastmod>
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   <url>
     <loc>https://isee.github.io/who.html</loc>
-    <lastmod>2025-02-06T10:23:33.245Z</lastmod>
+    <lastmod>2025-02-06T10:25:00.870Z</lastmod>
   </url>
   <url>
     <loc>https://isee.github.io/panels.html</loc>
-    <lastmod>2025-02-06T10:23:32.689Z</lastmod>
+    <lastmod>2025-02-06T10:25:00.333Z</lastmod>
   </url>
   <url>
     <loc>https://isee.github.io/dashboard.html</loc>
-    <lastmod>2025-02-06T10:23:33.998Z</lastmod>
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     <loc>https://isee.github.io/index.html</loc>
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     <loc>https://isee.github.io/install.html</loc>
-    <lastmod>2025-02-06T10:23:38.671Z</lastmod>
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     <loc>https://isee.github.io/resources.html</loc>
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