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Registry Bot
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Update repository from live dataset
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‎registry-data/full.json‎

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‎registry-data/namespaces/apd.json‎

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{
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"created": "2019-06-11T14:16:43.451+00:00",
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"deprecated": false,
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"deprecationDate": null,
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"deprecated": true,
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"deprecationDate": "2025-05-30T14:17:41.134+00:00",
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"deprecationOfflineDate": null,
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"deprecationStatement": null,
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"description": "The antimicrobial peptide database (APD) provides information on anticancer, antiviral, antifungal and antibacterial peptides.",
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"id": 817,
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"infoOnPostmortemAccess": null,
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"mirId": "MIR:00000278",
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"modified": "2019-06-11T14:16:43.451+00:00",
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"modified": "2025-05-30T14:17:41.135+00:00",
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"name": "APD",
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"namespaceEmbeddedInLui": false,
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"pattern": "^\\d{5}$",

‎registry-data/namespaces/ardb.json‎

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{
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"created": "2019-06-11T14:17:40.104+00:00",
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"deprecated": false,
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"deprecationDate": null,
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"deprecated": true,
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"deprecationDate": "2025-05-30T14:22:19.253+00:00",
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"deprecationOfflineDate": null,
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"deprecationStatement": null,
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"description": "The Antibiotic Resistance Genes Database (ARDB) is a manually curated database which characterises genes involved in antibiotic resistance. Each gene and resistance type is annotated with information, including resistance profile, mechanism of action, ontology, COG and CDD annotations, as well as external links to sequence and protein databases. This collection references resistance genes.",
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"id": 1472,
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"infoOnPostmortemAccess": null,
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"mirId": "MIR:00000522",
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"modified": "2019-06-11T14:17:40.104+00:00",
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"modified": "2025-05-30T14:23:55.497+00:00",
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"name": "Antibiotic Resistance Genes Database",
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"namespaceEmbeddedInLui": false,
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"pattern": "^[A-Z_]{3}[0-9]{4,}$",
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"prefix": "ardb",
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"renderDeprecatedLanding": false,
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"renderDeprecatedLanding": true,
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"resources": [
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{
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"authHelpDescription": null,

‎registry-data/namespaces/asap.json‎

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{
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"created": "2019-06-11T14:16:44.568+00:00",
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"deprecated": false,
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"deprecationDate": null,
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"deprecated": true,
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"deprecationDate": "2025-05-30T12:37:28.087+00:00",
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"deprecationOfflineDate": null,
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"deprecationStatement": null,
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"description": "ASAP (a systematic annotation package for community analysis of genomes) stores bacterial genome sequence and functional characterization data. It includes multiple genome sequences at various stages of analysis, corresponding experimental data and access to collections of related genome resources.",
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"id": 831,
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"infoOnPostmortemAccess": null,
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"mirId": "MIR:00000283",
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"modified": "2019-06-11T14:16:44.568+00:00",
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"modified": "2025-05-30T12:38:00.777+00:00",
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"name": "ASAP",
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"namespaceEmbeddedInLui": false,
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"pattern": "^[A-Za-z0-9-]+$",
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"providerCode": "CURATOR_REVIEW",
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"renderDeprecatedLanding": false,
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"renderProtectedLanding": false,
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"resourceHomeUrl": "http://asap.ahabs.wisc.edu/asap/home.php",
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"resourceHomeUrl": "https://www.genome.wisc.edu/tools/asap.htm",
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"sampleId": "ABE-0009634",
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"urlPattern": "http://asap.ahabs.wisc.edu/asap/feature_info.php?LocationID=WIS&FeatureID={$id}"
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}

‎registry-data/namespaces/aspgd.locus.json‎

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{
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"created": "2019-06-11T14:17:14.975+00:00",
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"deprecated": false,
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"deprecationDate": null,
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"deprecated": true,
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"deprecationDate": "2025-05-30T14:21:48.601+00:00",
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"deprecationOfflineDate": null,
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"deprecationStatement": null,
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"description": "The Aspergillus Genome Database (AspGD) is a repository for information relating to fungi of the genus Aspergillus, which includes organisms of clinical, agricultural and industrial importance. AspGD facilitates comparative genomics by providing a full-featured genomics viewer, as well as matched and standardized sets of genomic information for the sequenced aspergilli. This collection references gene information.",
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"id": 1195,
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"infoOnPostmortemAccess": null,
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"mirId": "MIR:00000412",
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"modified": "2019-06-11T14:17:14.975+00:00",
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"modified": "2025-05-30T14:21:48.602+00:00",
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"name": "AspGD Locus",
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"namespaceEmbeddedInLui": false,
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"pattern": "^[A-Za-z_0-9]+$",

‎registry-data/namespaces/aspgd.protein.json‎

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{
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"created": "2019-06-11T14:17:15.227+00:00",
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"deprecated": false,
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"deprecationDate": null,
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"deprecated": true,
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"deprecationDate": "2025-05-30T14:16:08.596+00:00",
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"deprecationOfflineDate": null,
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"deprecationStatement": null,
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"description": "The Aspergillus Genome Database (AspGD) is a repository for information relating to fungi of the genus Aspergillus, which includes organisms of clinical, agricultural and industrial importance. AspGD facilitates comparative genomics by providing a full-featured genomics viewer, as well as matched and standardized sets of genomic information for the sequenced aspergilli. This collection references protein information.",
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"id": 1198,
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"infoOnPostmortemAccess": null,
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"mirId": "MIR:00000413",
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"modified": "2019-06-11T14:17:15.227+00:00",
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"modified": "2025-05-30T14:16:08.599+00:00",
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"name": "AspGD Protein",
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"namespaceEmbeddedInLui": false,
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"pattern": "^[A-Za-z_0-9]+$",

‎registry-data/namespaces/autdb.json‎

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{
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"created": "2019-06-11T14:17:15.426+00:00",
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"deprecated": false,
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"deprecationDate": null,
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"deprecated": true,
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"deprecationDate": "2025-05-30T14:28:34.456+00:00",
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"deprecationOfflineDate": null,
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"deprecationStatement": null,
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"description": "AutDB is a curated database for autism research. It is built on information extracted from the studies on molecular genetics and biology of Autism Spectrum Disorders (ASD). The four modules of AutDB include information on Human Genes, Animal models, Protein Interactions (PIN) and Copy Number Variants (CNV) respectively. It provides an annotated list of ASD candidate genes in the form of reference dataset for interrogating molecular mechanisms underlying the disorder.",
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"id": 1200,
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"infoOnPostmortemAccess": null,
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"mirId": "MIR:00000415",
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"modified": "2019-06-11T14:17:15.426+00:00",
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"modified": "2025-05-30T14:28:34.457+00:00",
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"name": "AutDB",
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"namespaceEmbeddedInLui": false,
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"pattern": "^[A-Z]+[A-Z-0-9]{2,}$",

‎registry-data/namespaces/beetlebase.json‎

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{
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"created": "2019-06-11T14:16:14.695+00:00",
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"deprecated": false,
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"deprecationDate": null,
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"deprecated": true,
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"deprecationDate": "2025-05-30T14:31:34.157+00:00",
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"deprecationOfflineDate": null,
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"deprecationStatement": null,
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"description": "BeetleBase is a comprehensive sequence database and community resource for Tribolium genetics, genomics and developmental biology. It incorporates information about genes, mutants, genetic markers, expressed sequence tags and publications.",
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"id": 487,
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"infoOnPostmortemAccess": null,
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"mirId": "MIR:00000157",
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"modified": "2019-06-11T14:16:14.695+00:00",
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"modified": "2025-05-30T14:31:34.160+00:00",
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"name": "BeetleBase",
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"namespaceEmbeddedInLui": false,
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"pattern": "^TC\\d+$",

‎registry-data/namespaces/biosystems.json‎

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{
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"created": "2019-06-11T14:15:58.906+00:00",
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"deprecated": false,
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"deprecationDate": null,
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"deprecated": true,
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"deprecationDate": "2025-05-30T13:59:24.086+00:00",
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"deprecationOfflineDate": null,
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"deprecationStatement": null,
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"description": "The NCBI BioSystems database centralizes and cross-links existing biological systems databases, increasing their utility and target audience by integrating their pathways and systems into NCBI resources.",
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"id": 318,
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"infoOnPostmortemAccess": null,
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"mirId": "MIR:00000097",
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"modified": "2019-06-11T14:15:58.906+00:00",
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"modified": "2025-05-30T14:00:10.791+00:00",
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"name": "BioSystems",
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"namespaceEmbeddedInLui": false,
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"pattern": "^\\d+$",
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"prefix": "biosystems",
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"renderDeprecatedLanding": false,
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"renderDeprecatedLanding": true,
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"resources": [
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{
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"authHelpDescription": null,

‎registry-data/namespaces/bmrb.json‎

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"providerCode": "bmrb",
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"renderDeprecatedLanding": false,
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"renderProtectedLanding": false,
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"resourceHomeUrl": "http://www.bmrb.wisc.edu/",
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"resourceHomeUrl": "https://bmrb.io/",
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"sampleId": "15000",
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"urlPattern": "http://rest.bmrb.wisc.edu/bmrb/{$id}/html"
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"urlPattern": "https://bmrb.io/data_library/summary/index.php?bmrbId={$id}"
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}
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],
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"sampleId": "15000",

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