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README.md

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**Python Module**: Python 3.10 or higher, Python 3.12 recommended
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## Installation, documentation and examples
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https://docs.internationalbrainlab.org
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Installation: https://docs.internationalbrainlab.org/02_installation.html
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Documentation and examples: https://docs.internationalbrainlab.org
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## Contribution and development practices
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See https://int-brain-lab.github.io/iblenv/07_contribution.html
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See https://docs.internationalbrainlab.org/09_contribution.html
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We use Semantic Versioning.
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- run tests `python -m unittest discover`
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Pull request to `develop` or `main`.
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## Matlab Library
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The Matlab library has moved to its own repository here: https://github.com/int-brain-lab/ibllib-matlab/

examples/data_release/2025_data_release_autism_noel.md

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We recommend you download the data via ONE.
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## Overview of the Data
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We have released data from 198 Neuropixel experimental sessions, with single Neuropixel recordings, referred to as probe insertions. Those were obtained with 62 genetically modified subjects performing the IBL task.
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As output of spike-sorting, there are 71,067 units; of which 12,163 are passing IBL automated quality control.
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We have released data from 364 Neuropixel recordings, referred to as probe insertions. Those were obtained with 62 genetically modified subjects performing the IBL task.
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As output of spike-sorting, there are 129,313 units; of which 22,008 are passing IBL automated quality control.
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| Strain | Subject Count | Recording Count | Units Count | Good Units Count |
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|:---------|--------------:|----------------:|------------:|-----------------:|
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| Cntnap2 | 17 | 52 | 20,467 | 2683 |
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| Fmr1 | 15 | 54 | 17,801 | 3491 |
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| Shank3t | 15 | 41 | 16,357 | 2911 |
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| Wildtype | 15 | 51 | 16,442 | 3078 |
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| Total | 62 | 198 | 71,067 | 12,163 |
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| strain | n_subjects | n_recordings | n_units | n_good_units |
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|:---------|-------------:|-------------:|--------:|-------------:|
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| Cntnap2 | 16 | 85 | 31,082 | 4,211 |
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| Fmr1 | 15 | 105 | 34,401 | 6,215 |
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| Shank3t | 16 | 75 | 31,679 | 5,423 |
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| Wildtype | 15 | 99 | 32,151 | 6,159 |
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| Total | 62 | 364 | 129,313 | 22,008 |
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## Data structure and download
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The organisation of the data follows the standard IBL data structure.
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Please see
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Here is a minimal example of how to download the data for one of the insertions using `ibllib`
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```python
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import pandas as pd
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from brainbox.io.one import SpikeSortingLoader, SessionLoader
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from one.api import ONE
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one = ONE(base_url='https://openalyx.internationalbrainlab.org')
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insertions = one.search_insertions(project='angelaki_mouseASD')
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ssl = SpikeSortingLoader(one=one, pid=str(insertions[0]))
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sl = SessionLoader(one=one, eid=ssl.eid)
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sl.load_trials()
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spikes, clusters, channels = ssl.load_spike_sorting()
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df_clusters = pd.DataFrame(ssl.merge_clusters(spikes, clusters, channels))
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print(df_clusters)
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print(sl.trials)
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```
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To go further with more advanced examples, see:
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* [These instructions](https://int-brain-lab.github.io/iblenv/notebooks_external/data_structure.html) to download an example dataset for one session, and get familiarised with the data structure
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* [These instructions](https://int-brain-lab.github.io/iblenv/notebooks_external/data_download.html) to learn how to use the ONE-api to search and download the released datasets
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Note:
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* The tag associated to this release is `2025_Q3_Noel_et_al_Autism`
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* The project associated to this release is `angelaki_mouseASD`
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## How to cite this dataset
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If you are using this dataset for your research please cite:

examples/exploring_data/data_download.ipynb

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{
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"cell_type": "markdown",
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"metadata": {},
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"source": "## Setting up credentials"
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"source": [
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"## Setting up credentials"
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]
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},
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{
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"cell_type": "code",

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