Releases: int-brain-lab/ibllib
Releases · int-brain-lab/ibllib
Release 2.15.1
- atlas: gene-expression backend and MRI Toronto atlas stretch and squeeze factors @dbirman @oliche #509 #513
- FDR correction (Benjamin-Hochmann) to correct for multiple testing optional @guidomeijer #506
- SpikeSortingLoader can be used with ONE local mode @juhuntenburg #514
Dynamic Pipeline
What's Changed
- Cleanup by @oliche in #501
- Remove hold on tasks if parent is Incomplete by @juhuntenburg in #505
- Widefield2 by @k1o0 in #504
- CI QC Tests by @k1o0 in #507
- Kim atlas by @mayofaulkner in #508
- Task data repo by @mayofaulkner in #510
- Fiberphotometry by @oliche in #512
Full Changelog: 2.14.0...2.15.0
QC changes and SessionLoader
- Adding brainbox.io.one.SessionLoader for standardized loading of session data
- Changes to TaskQC, VideoQC and DLCQC thresholds and aggregation
- Unfreezing numpy version
- Adding probabilistic brain regions lookup in ibllib.atlas.atlas.BrainAtlas.get_labels
- Removing two voxelless areas from beryl atlas
- Minor updates to audio events detection and audio welchogram
2.13.6
2.13.5 Pseudo session creation contrast distributions fixed
Merge pull request #491 from int-brain-lab/hotfix/2.13.5 Hotfix/2.13.5
Hotfix: local paths and version number
Hotfix: datahandler self.local_paths defined in init
Hotfix: one globus
- Hotfix: globus imports were mixed one.globus and one.remote
Release 2.13.0
- Deprecated ibllib.version
- Fix Globus patcher
- Add SpikeSorting Loader samples2times function
- Fix atlas.BrainCoordinate.xyz2i functions to not quietly wrap indices out of volume bounds.
- Set jobs to Held if parent jobs are Started or Abandoned as well
- Reverse matplotlib colorbars in density displays
Video compression jobs and jobs with waiting parents
- Set video compression jobs to priority 90
- Set jobs to Held if parents are Waiting
Large jobs as service
- brainbox.io.one.SpikeSortingLoader: option to load using
collectionargument - Restructuring of how jobs are run on local servers, run large jobs as service