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alignment/alignment.cpp

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@@ -88,6 +88,12 @@ void cmaple::Alignment::read(std::istream& aln_stream,
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}
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readMaple(aln_stream);
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}
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// print alignment information
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if (cmaple::verbose_mode >= cmaple::VB_MED) {
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cout << "- Number of sequences: " << data.size() << endl;
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cout << "- Sequence length: " << ref_seq.size() << endl;
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}
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// sort sequences by their distances to the reference sequence
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sortSeqsByDistances();

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