Run pytest unit tests on circleci (#50)

* Update specfiles

* Run pytests on circleci

* Add backoff to deps

* Remove github action

* typo fix

* Comment out S1 test data download

Currently unused

Co-authored-by: Zhang Yunjun <[email protected]>

Author: rtburns-jpl

.circleci/config.yml

@@ -11,13 +11,21 @@ jobs:
           command: |
             conda install -y --file .circleci/specfile.txt
       - run:
-          name: "Build s1-reader python package"
+          name: "Build s1reader python package"
           command: |
             python3 -m build --sdist --wheel .
+     #- run:
+     #    name: "Download S1 test data"
+     #    command: |
+     #      python3 tests/download_data.py
       - run:
-          name: "Download S1 test data"
+          name: "Install s1reader python package"
           command: |
-            python3 tests/download_data.py
+            python3 -m pip install .
+      - run:
+          name: "Run unit tests"
+          command: |
+            python3 -m pytest
 
 workflows:
   build-workflow:

.circleci/freeze-deps.sh

@@ -1,2 +1,2 @@
 #!/bin/sh
-docker run -v "$PWD:/mnt" -w /mnt --rm -it continuumio/miniconda3 bash -c 'conda install -y -c conda-forge isce3=0.6 build setuptools && conda list --explicit > specfile.txt'
+docker run -v "$PWD:/mnt" -w /mnt --rm -it continuumio/miniconda3 bash -c 'conda install -y -c conda-forge isce3=0.6 build setuptools pytest isce3 shapely backoff && conda list --explicit > specfile.txt'

.circleci/specfile.txt

@@ -2,8 +2,8 @@
 # $ conda create --name <env> --file <this file>
 # platform: linux-64
 @EXPLICIT
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-https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2022.5.18.1-ha878542_0.tar.bz2
+https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2
+https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2022.6.15-ha878542_0.tar.bz2
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@@ -12,39 +12,37 @@ https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.36.1-hea4e1c9
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-https://repo.anaconda.com/pkgs/main/noarch/tzdata-2021e-hda174b7_0.conda
+https://repo.anaconda.com/pkgs/main/noarch/tzdata-2022a-hda174b7_0.conda
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-https://repo.anaconda.com/pkgs/main/linux-64/libgomp-11.2.0-h1234567_0.conda
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+https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-2_kmp_llvm.tar.bz2
+https://conda.anaconda.org/conda-forge/linux-64/libgcc-ng-12.1.0-h8d9b700_16.tar.bz2
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-https://conda.anaconda.org/conda-forge/linux-64/libzlib-1.2.11-h166bdaf_1014.tar.bz2
+https://conda.anaconda.org/conda-forge/linux-64/libzlib-1.2.12-h166bdaf_1.tar.bz2
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-https://conda.anaconda.org/conda-forge/linux-64/openssl-3.0.3-h166bdaf_0.tar.bz2
+https://conda.anaconda.org/conda-forge/linux-64/openssl-3.0.4-h166bdaf_2.tar.bz2
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@@ -59,96 +57,104 @@ https://conda.anaconda.org/conda-forge/linux-64/xorg-xextproto-7.3.0-h7f98852_10
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+https://repo.anaconda.com/pkgs/main/linux-64/zlib-1.2.12-h7f8727e_1.conda
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-https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-14_linux64_openblas.tar.bz2
+https://conda.anaconda.org/conda-forge/linux-64/hdf4-4.2.15-h10796ff_3.tar.bz2
+https://conda.anaconda.org/conda-forge/linux-64/libblas-3.9.0-15_linux64_openblas.tar.bz2
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