Update remaining runconfig parameters from camel case to snake case (#959)

* update remaining runconfig parameters from camel case to snake case

* update the struct names in focus.py to match Geometry to geometry

Author: gshiroma

python/packages/nisar/workflows/focus.py

@@ -564,8 +564,8 @@ def focus(runconfig):
     if attitude:
         slc.set_attitude(attitude, orbit.reference_epoch)
     slc.copy_identification(raw, polygon=polygon,
-        track=cfg.Geometry.relative_orbit_number,
-        frame=cfg.Geometry.frame_number,
+        track=cfg.geometry.relative_orbit_number,
+        frame=cfg.geometry.frame_number,
         start_time=ogrid["A"].sensing_datetime(0),
         end_time=ogrid["A"].sensing_datetime(ogrid["A"].length - 1))
 

share/nisar/defaults/focus.yaml

@@ -56,7 +56,7 @@ runconfig:
             # Handy to set to "SLC" until other ISCE tools updated.
             product_type: RSLC
 
-        Geometry:
+        geometry:
             relative_orbit_number: 1
             frame_number: 1
 

share/nisar/examples/slc_workflow.yaml

@@ -55,7 +55,7 @@ runconfig:
         primary_executable:
             product_type: RSLC
 
-        Geometry:
+        geometry:
             relative_orbit_number: 1
             frame_number: 150
 

share/nisar/schemas/focus.yaml

@@ -54,17 +54,17 @@ runconfig:
       product_type: str()
       composite_release_id: regex(r'\w\d\d\d\d\d', name='CRID')
       processing_type: enum('PR', 'UR') # production, urgent response
-      MissionId: enum('NISAR')
+      mission_id: enum('NISAR')
       product_accuracy: enum('P', 'M', 'N', 'F', 'T')
     debug_level_group:
       debug_switch: bool()
-    Geometry:
-      CycleNumber: int(min=1, max=999)
+    geometry:
+      cycle_number: int(min=1, max=999)
       relative_orbit_number: int(min=1, max=173)
       frame_number: int(min=1, max=176)
-      OrbitDirection: enum('Descending', 'Ascending')
-      TrackFramePolygon: str(required=False)
-      FullCoverageThresholdPercent: num(min=0.0, required=False)
+      orbit_direction: enum('Descending', 'Ascending')
+      track_frame_polygon: str(required=False)
+      full_coverage_threshold_percent: num(min=0.0, required=False)
     worker:
       # Whether or not to use GPU, optional. Defaults to True if available.
       gpu_enabled: bool(required=False)

tools/imagesets/runconfigs/end2end_pair_ALPSRP110160680_ALPSRP116870680_Rosamond_rslc_ref.yaml

@@ -25,17 +25,17 @@ runconfig:
         primary_executable:
             product_type: RSLC
             composite_release_id: D00200
-            MissionId: NISAR
+            mission_id: NISAR
             processing_type: PR
             product_accuracy: P
         debug_level_group:
             debug_switch: false
-        Geometry:
-            CycleNumber: 1
+        geometry:
+            cycle_number: 1
             relative_orbit_number: 1
             frame_number: 1
-            OrbitDirection: Ascending
-            TrackFramePolygon: '{"type": "Polygon", "coordinates" : [[
+            orbit_direction: Ascending
+            track_frame_polygon: '{"type": "Polygon", "coordinates" : [[
                 [-118.497451142052, 34.1199112182309],
                 [-118.411141237238, 34.1328931495463],
                 [-118.325806245573, 34.1456651751558],
@@ -78,7 +78,7 @@ runconfig:
                 [-118.519274986419, 34.218647029132],
                 [-118.497451142052, 34.1199112182309]]]
             }'
-            FullCoverageThresholdPercent: 75.0
+            full_coverage_threshold_percent: 75.0
         worker:
             gpu_enabled: true
             gpu_id: 0

tools/imagesets/runconfigs/end2end_pair_ALPSRP110160680_ALPSRP116870680_Rosamond_rslc_sec.yaml

@@ -25,17 +25,17 @@ runconfig:
         primary_executable:
             product_type: RSLC
             composite_release_id: D00200
-            MissionId: NISAR
+            mission_id: NISAR
             processing_type: PR
             product_accuracy: P
         debug_level_group:
             debug_switch: false
-        Geometry:
-            CycleNumber: 1
+        geometry:
+            cycle_number: 1
             relative_orbit_number: 1
             frame_number: 1
-            OrbitDirection: Ascending
-            TrackFramePolygon: '{"type": "Polygon", "coordinates" : [[
+            orbit_direction: Ascending
+            track_frame_polygon: '{"type": "Polygon", "coordinates" : [[
                 [-118.494045678471, 34.1198833322943],
                 [-118.407721743711, 34.1328597142333],
                 [-118.322373469636, 34.1456261493881],
@@ -78,7 +78,7 @@ runconfig:
                 [-118.515854392186, 34.2186509505216],
                 [-118.494045678471, 34.1198833322943]]]
             }'
-            FullCoverageThresholdPercent: 75.0
+            full_coverage_threshold_percent: 75.0
         worker:
             gpu_enabled: true
             gpu_id: 0

tools/imagesets/runconfigs/end2end_pair_ALPSRP262866750_ALPSRP269576750_Chile_rslc_ref.yaml

@@ -25,17 +25,17 @@ runconfig:
         primary_executable:
             product_type: RSLC
             composite_release_id: D00200
-            MissionId: NISAR
+            mission_id: NISAR
             processing_type: PR
             product_accuracy: P
         debug_level_group:
             debug_switch: false
-        Geometry:
-            CycleNumber: 1
+        geometry:
+            cycle_number: 1
             relative_orbit_number: 1
             frame_number: 1
-            OrbitDirection: Ascending
-            TrackFramePolygon: '{"type": "Polygon", "coordinates" : [[
+            orbit_direction: Ascending
+            track_frame_polygon: '{"type": "Polygon", "coordinates" : [[
                 [-68.1893955973867, -21.943952177674],
                 [-68.113591144119, -21.9262772692904],
                 [-68.0386718155604, -21.9087702941051],
@@ -78,7 +78,7 @@ runconfig:
                 [-68.215251992181, -21.8455674476941],
                 [-68.1893955973867, -21.943952177674]]]
             }'
-            FullCoverageThresholdPercent: 75.0
+            full_coverage_threshold_percent: 75.0
         worker:
             gpu_enabled: true
             gpu_id: 0

tools/imagesets/runconfigs/end2end_pair_ALPSRP262866750_ALPSRP269576750_Chile_rslc_sec.yaml

@@ -25,17 +25,17 @@ runconfig:
         primary_executable:
             product_type: RSLC
             composite_release_id: D00200
-            MissionId: NISAR
+            mission_id: NISAR
             processing_type: PR
             product_accuracy: P
         debug_level_group:
             debug_switch: false
-        Geometry:
-            CycleNumber: 1
+        geometry:
+            cycle_number: 1
             relative_orbit_number: 1
             frame_number: 1
-            OrbitDirection: Ascending
-            TrackFramePolygon: '{"type": "Polygon", "coordinates" : [[
+            orbit_direction: Ascending
+            track_frame_polygon: '{"type": "Polygon", "coordinates" : [[
                 [-68.1914812891183, -21.9450716883908],
                 [-68.1156573726063, -21.9274132197719],
                 [-68.0407192606459, -21.9099225763898],
@@ -78,7 +78,7 @@ runconfig:
                 [-68.2173368757781, -21.8466248657298],
                 [-68.1914812891183, -21.9450716883908]]]
             }'
-            FullCoverageThresholdPercent: 75.0
+            full_coverage_threshold_percent: 75.0
         worker:
             gpu_enabled: true
             gpu_id: 0

tools/imagesets/runconfigs/rslc_ALPSRP037370690.yaml

@@ -49,18 +49,18 @@ runconfig:
             # Handy to set to "SLC" until other ISCE tools updated.
             product_type: RSLC
             composite_release_id: D00200
-            MissionId: NISAR
+            mission_id: NISAR
             processing_type: PR
             product_accuracy: P
         debug_level_group:
             debug_switch: false
-        Geometry:
-            CycleNumber: 1
+        geometry:
+            cycle_number: 1
             relative_orbit_number: 2
             frame_number: 4
-            OrbitDirection: Ascending
-            TrackFramePolygon: '{"type": "Polygon", "coordinates": []}'
-            FullCoverageThresholdPercent: 75.0
+            orbit_direction: Ascending
+            track_frame_polygon: '{"type": "Polygon", "coordinates": []}'
+            full_coverage_threshold_percent: 75.0
         # Whether or not to use GPU, optional. Defaults to True if available.
         worker:
             gpu_enabled: True

tools/imagesets/runconfigs/rslc_ALPSRP271200680.yaml

@@ -49,18 +49,18 @@ runconfig:
             # Handy to set to "SLC" until other ISCE tools updated.
             product_type: RSLC
             composite_release_id: D00200
-            MissionId: NISAR
+            mission_id: NISAR
             processing_type: PR
             product_accuracy: P
         debug_level_group:
             debug_switch: false
-        Geometry:
-            CycleNumber: 1
+        geometry:
+            cycle_number: 1
             relative_orbit_number: 2
             frame_number: 4
-            OrbitDirection: Ascending
-            TrackFramePolygon: '{"type": "Polygon", "coordinates": []}'
-            FullCoverageThresholdPercent: 75.0
+            orbit_direction: Ascending
+            track_frame_polygon: '{"type": "Polygon", "coordinates": []}'
+            full_coverage_threshold_percent: 75.0
         # Whether or not to use GPU, optional. Defaults to True if available.
         worker:
             gpu_enabled: True