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Releases: jonchang/tact

v0.3.0

14 Jul 07:53

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Overhauls tact_build_taxonomic_tree in various ways

  • Now doesn't care if its input is sorted
  • Will automatically modify non-unique rank names to become unique
  • Will detect and warn you of empty cells in your taxonomy spreadsheet
  • Checks that the resultant phylogeny is actually valid

Also turns off a few annoying warnings in tact_add_taxa.

v0.2.7

14 Jul 07:52

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Fix some DendroPy error messages.

v0.2.6

13 Jul 06:46

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Tweak build system

v0.2.5

08 Jul 11:27

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  • Fix a rare optimization bug when using the Yule model
  • Fix a rare optimization bug when analysing particularly small phylogenies.

v0.2.4

10 Mar 06:38

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  • dependency updates

v0.2.3

03 Mar 16:41

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  • tact_add_taxa now correctly restores terminal settings when quitting (#101)

v0.2.2

02 Mar 02:47

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  • tact_add_taxa no longer emits rooting annotations for Newick-format phylogenies (#98)
  • Various updates of TACT's dependencies

v0.2.1

22 Nov 14:02

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This is a patch release for dependency updates.

v0.2.0

25 Sep 03:25

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This release of TACT adds a --yule option for pure-birth estimations, and also uses arbitrary-precision math in more places to avoid under/overflow errors.

v0.1.4

24 Sep 04:08
5fdb9ab

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Update pyproject.toml