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DESCRIPTION
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Package: EASIER
Type: Package
Title: EwAS: quality control, meta-analysIs and EnRichment
Version: 0.1.2.26
Author: Dolors Pelegrí, Marta Cosín, Mariona Bustamante and Juan R Gonzalez
Maintainer: Dolors Pelegrí <dolors.pelegri@isglobal.org>
Description: The EASIER package performs epigenetic wide-association study (EWAS) downstream analysis
Quality Control of EWAS results
Meta-analysis using GWAMA
Functional enrichment
License: MIT License
Encoding: UTF-8
LazyData: true
Imports:
rasterpdf,
meta,
tidyverse,
dplyr,
stringr,
ggplot2,
VennDiagram,
RColorBrewer,
reshape,
ggsignif,
missMethyl,
org.Hs.eg.db,
IlluminaHumanMethylation450kanno.ilmn12.hg19,
IlluminaHumanMethylationEPICanno.ilm10b4.hg19,
tools,
brgeEnrich,
data.table
LinkingTo: Rcpp
RoxygenNote: 7.2.0
Depends:
R (>= 3.5),
tidyverse
VignetteBuilder: knitr
Suggests: BiocStyle,
knitr,
rmarkdown