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lines changed Original file line number Diff line number Diff line change @@ -37,6 +37,19 @@ via picassosr.
3737
3838## Installation
3939
40+ ### Prerequisites
41+
42+ Make sure to have (ana)conda installed. On Mac OS, open the terminal (command + space,
43+ type "terminal" hit enter). Then, one after another execute the follwing commands
44+ - ` curl -O https://repo.anaconda.com/archive/Anaconda3-2024.09-MacOSX-x86_64.sh `
45+ - ` bash Anaconda3-2024.09-MacOSX-x86_64.sh `
46+ - ` ~/anaconda3/bin/conda init `
47+ - ` conda config --remove channels defaults `
48+ - ` conda config --add channels conda-forge `
49+ - close the terminal and reopen it, to apply the changes.
50+
51+ ### picasso-workflow specific installation
52+
4053- create a new anaconda environment: ` conda create -n picasso-workflow python=3.10 `
4154- If you want to use a local development version of picasso, install that first:
4255 - `cd /path/to/picasso`
@@ -49,6 +62,7 @@ via picassosr.
4962## Usage
5063
5164- see examples in the folder "examples".
65+ - if you have access, see examples in "/Volumes/pool-miblab/users/grabmayr/picasso-workflow_testdata"
5266
5367### One-click installers
5468
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