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Updated Tools collection (markdown)
Reorganize sections
add link to Alain Lafon’s tool collection
Reset edit-file before we try to use it for diffing
The run_script and run_command tools had lots of overlap. `run_script` was unclear to llms and needed to be called multiple times before they got it right. `run_command` can now be scoped to a working_dir and has more comprehensive documentation.
Add showing diff buffers in edit_file tool.
Adding edit-file tool.
Adding run_async_command tool.
fix syntax
add links to discussions page
categorize properly
create Tools collection wiki entry