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Replace longestcds with longestorf
Revert "Add explanatory diagrams to key wiki workflow pages" This reverts commit 113df7b70484602c14c201d32921f2e708f4a025.
Add explanatory diagrams to key wiki workflow pages
Updated Preparing CSUBST inputs (markdown)
Remove PAL2NAL mention from prep guide
Replace transeq with cdskit translate in prep guide
Replace tranalign with cdskit backalign in preparation guide
Replace TransDecoder example with cdskit longestcds
Refresh wiki docs for dependencies and state plotting
Revert 8fa06ae31ba70386c75085b01dd3453e01434465...0f35250bdf66f19e3a0b92047e12008740db9032 on Preparing CSUBST inputs
Created Preparing CSUBST inputs (markdown)