Bugs are fixed

Author: serjisa

sclitr/tl.py

@@ -737,7 +737,7 @@ def summarize_expression(
     for clone in clones.obs_names:
         if strategy == "average":
             try:
-                clones_expr[clone] = X[(adata.obs[obs_name] == clone) & mask].mean(axis=0).A[0]
+                clones_expr[clone] = X[(adata.obs[obs_name].values == clone) & mask].mean(axis=0).A[0]
             except ZeroDivisionError:
                 clones_expr[clone] = np.zeros(len(var_names))
         else:

tests/test_core.py

@@ -1,9 +1,6 @@
 import numpy as np
 import scanpy as sc
 import pytest
-
-import sys
-sys.path.append("/home/sergey/tools/scLiTr/")
 import sclitr as sl
 
 @pytest.fixture(scope="session")