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lines changed Original file line number Diff line number Diff line change @@ -20,7 +20,7 @@ include { UNTAR } from '../modules/nf-core/untar/main'
2020include { SEGGER_CREATE_TRAIN_PREDICT } from ' ../subworkflows/local/segger_create_train_predict/main'
2121include { PROSEG_PRESET_PROSEG2BAYSOR } from ' ../subworkflows/local/proseg_preset_proseg2baysor/main'
2222include { BAYSOR_GENERATE_PREVIEW } from ' ../subworkflows/local/baysor_generate_preview/main'
23- include { BAYSOR_RUN_TRANSCRIPTS_PARQUET } from ' ../subworkflows/local/baysor_run_transcripts_csv /main'
23+ include { BAYSOR_RUN_TRANSCRIPTS_PARQUET } from ' ../subworkflows/local/baysor_run_transcripts_parquet /main'
2424
2525// image-based segmentation subworklfows
2626include { BAYSOR_RUN_PRIOR_SEGMENTATION_MASK } from ' ../subworkflows/local/baysor_run_prior_segmentation_mask/main'
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