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disable infer_from_cds tests until they are implemented
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tests/extractors/test_protein.py

Lines changed: 4 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -337,7 +337,8 @@ def test_5UTRFetcher__read_utr():
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assert utr5.iloc[0].End == 17565981
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assert utr5.iloc[0].Strand == "+"
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assert utr5.equals(UTRFetcher._read_utr(chr22_gtf_file, feature_type="5UTR", infer_from_cds=True))
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# TODO: implement
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# assert utr5.equals(UTRFetcher._read_utr(chr22_gtf_file, feature_type="5UTR", infer_from_cds=True))
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def test_3UTRFetcher__read_utr():
@@ -350,4 +351,5 @@ def test_3UTRFetcher__read_utr():
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assert utr3.iloc[0].End == 17596583
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assert utr3.iloc[0].Strand == "+"
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assert utr3.equals(UTRFetcher._read_utr(chr22_gtf_file, feature_type="3UTR", infer_from_cds=True))
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# TODO: implement
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# assert utr3.equals(UTRFetcher._read_utr(chr22_gtf_file, feature_type="3UTR", infer_from_cds=True))

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