chore: bump version 0.0.4 → 0.0.5

Author: qin-yu

stardist/conda-recipe/meta.yaml

@@ -1,13 +1,13 @@
 package:
-  name: 'run-stardist'
-  version: '0.0.4'
+  name: "run-stardist"
+  version: "0.0.5"
 
 source:
   path: ..
 
 build:
   noarch: python
-  script: 'pip install . --no-deps --ignore-installed --no-cache-dir'
+  script: "pip install . --no-deps --ignore-installed --no-cache-dir"
   number: 1
   entry_points:
     - train-stardist = runstardist.train:main
@@ -17,14 +17,18 @@ requirements:
   build:
     - python
     - pip
+
   run:
     - python>=3.10 # for `|` in pydantic
-    # - tensorflow
+    # - tensorflow # many users have their own installation
     - stardist
     - wandb
     - pydantic
+    - pyyaml
 
 about:
   home: https://github.com/kreshuklab/go-nuclear
+  doc_url: https://kreshuklab.github.io/go-nuclear/
+  dev_url: https://github.com/kreshuklab/go-nuclear
   license: MIT
   license_family: MIT

stardist/runstardist/__version__.py

@@ -1 +1 @@
-__version__ = "0.0.4"
+__version__ = "0.0.5"

stardist/setup.py

@@ -1,20 +1,30 @@
-from setuptools import setup, find_packages
+from pathlib import Path
 
-exec(open('runstardist/__version__.py', encoding='utf-8').read())  # pylint: disable=exec-used
+from setuptools import find_packages, setup
+
+
+exec(open("runstardist/__version__.py", encoding="utf-8").read())
 
 setup(
-    name='run-stardist',
-    version=__version__,  # pylint: disable=undefined-variable
-    author='Qin Yu',
-    author_email='qin.yu@embl.de',
-    license='MIT',
-    description='Train and use StarDist models',
-    url='https://github.com/kreshuklab/go-nuclear',
+    name="run-stardist",
+    version=__version__,
+    author="Qin Yu",
+    author_email="qin.yu@embl.de",
+    license="MIT",
+    description="Train and use StarDist models",
+    long_description=(Path(__file__).parent / "README.md").read_text(),
+    long_description_content_type="text/markdown",
+    url="https://github.com/kreshuklab/go-nuclear",
+    project_urls={
+        "Documentation": "https://kreshuklab.github.io/go-nuclear/",
+        "Source": "https://github.com/kreshuklab/go-nuclear",
+        "Bug Tracker": "https://github.com/kreshuklab/go-nuclear/issues",
+    },
     packages=find_packages(),
     entry_points={
-        'console_scripts': [
-            'train-stardist=runstardist.train:main',
-            'predict-stardist=runstardist.predict:main',
+        "console_scripts": [
+            "train-stardist=runstardist.train:main",
+            "predict-stardist=runstardist.predict:main",
         ],
     },
 )