update docs, README, CITATION to include new JOSS paper

Author: kylejgillett

docs/_sources/about.rst.txt

@@ -1,7 +1,7 @@
 📖 About
 =========
 
-SounderPy: A sounding visualization tool for severe-weather analysis and forecasting
+SounderPy: An atmospheric sounding visualization and analysis tool for Python
 --------------------------------------------------------------------------------------
 
 
@@ -27,6 +27,7 @@ novices. A number of scientific Python libraries build the base of SounderPy’s
 durable functionality, such as NumPy, Matplotlib, xarray, Metpy, and SHARPpy. SounderPy is 
 available through GitHub and PyPi and is distributed under an MIT license.
 
+Read more about SounderPy in this article published in the Journal of Open Source Software: `SounderPy: An atmospheric sounding visualization and analysis tool for Python <https://doi.org/10.21105/joss.08087>`_.
 
 .. image:: _static/images/sounderpy_poster.png
    :width: 500 px
@@ -117,13 +118,12 @@ Authors and Contributors
 
 Citing SounderPy
 -----------------
-	.. image:: https://zenodo.org/badge/DOI/10.5281/zenodo.10443609.svg
-	   :target: https://doi.org/10.5281/zenodo.10443609
-	   :alt: DOI
+    .. image:: https://joss.theoj.org/papers/10.21105/joss.08087/status.svg
+       :target: https://doi.org/10.21105/joss.08087
 
 
 	in AMS format:
-	     Gillett, K., 2025: SounderPy: Vertical Profile Data Retrieval & Analysis Tool for Python (Version 3.0.8). Py-Pi, https://pypi.org/project/sounderpy/
+	     Gillett, K. J., 2025: SounderPy: An atmospheric sounding visualization and analysis tool for Python. J. Open Source Software, 10 (112), 8087, https://doi.org/10.21105/joss.08087
 
 
 ***************************************************************

docs/about.html

@@ -49,7 +49,7 @@
               <p class="caption" role="heading"><span class="caption-text">General:</span></p>
 <ul class="current">
 <li class="toctree-l1 current"><a class="current reference internal" href="#">📖 About</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="#sounderpy-a-sounding-visualization-tool-for-severe-weather-analysis-and-forecasting">SounderPy: A sounding visualization tool for severe-weather analysis and forecasting</a></li>
+<li class="toctree-l2"><a class="reference internal" href="#sounderpy-an-atmospheric-sounding-visualization-and-analysis-tool-for-python">SounderPy: An atmospheric sounding visualization and analysis tool for Python</a></li>
 <li class="toctree-l2"><a class="reference internal" href="#installation">Installation</a></li>
 <li class="toctree-l2"><a class="reference internal" href="#sample-basic-use">Sample Basic Use</a></li>
 <li class="toctree-l2"><a class="reference internal" href="#authors-and-contributors">Authors and Contributors</a></li>
@@ -103,8 +103,8 @@
 
   <section id="about">
 <h1>📖 About<a class="headerlink" href="#about" title="Link to this heading"></a></h1>
-<section id="sounderpy-a-sounding-visualization-tool-for-severe-weather-analysis-and-forecasting">
-<h2>SounderPy: A sounding visualization tool for severe-weather analysis and forecasting<a class="headerlink" href="#sounderpy-a-sounding-visualization-tool-for-severe-weather-analysis-and-forecasting" title="Link to this heading"></a></h2>
+<section id="sounderpy-an-atmospheric-sounding-visualization-and-analysis-tool-for-python">
+<h2>SounderPy: An atmospheric sounding visualization and analysis tool for Python<a class="headerlink" href="#sounderpy-an-atmospheric-sounding-visualization-and-analysis-tool-for-python" title="Link to this heading"></a></h2>
 <a class="reference internal image-reference" href="_images/example-sounding_light4.png"><img alt="_images/example-sounding_light4.png" class="align-center" src="_images/example-sounding_light4.png" style="width: 500px;" />
 </a>
 <hr class="docutils" />
@@ -122,6 +122,7 @@ <h2>SounderPy: A sounding visualization tool for severe-weather analysis and for
 novices. A number of scientific Python libraries build the base of SounderPy’s efficient and
 durable functionality, such as NumPy, Matplotlib, xarray, Metpy, and SHARPpy. SounderPy is
 available through GitHub and PyPi and is distributed under an MIT license.</p>
+<p>Read more about SounderPy in this article published in the Journal of Open Source Software: <a class="reference external" href="https://doi.org/10.21105/joss.08087">SounderPy: An atmospheric sounding visualization and analysis tool for Python</a>.</p>
 <a class="reference internal image-reference" href="_images/sounderpy_poster.png"><img alt="_images/sounderpy_poster.png" class="align-center" src="_images/sounderpy_poster.png" style="width: 500px;" />
 </a>
 <br><p>SounderPy has been used by several institutions. For example, this tool has been implemented by the Des Moines, Columbia, Grand Forks, Little Rock, Omaha, &amp; Grand Rapids National Weather Service Offices; the State University of New York at Albany, Mississippi State University, the University of North Dakota, and others. Many students at various universities have used SounderPy in projects, posters, and papers, such as students at The University of Oklahoma, Ohio State University, Central Michigan University, Iowa State University, Texas A&amp;M University, &amp; Rizal Technological University.</p>
@@ -185,13 +186,7 @@ <h2>Authors and Contributors<a class="headerlink" href="#authors-and-contributor
 <section id="citing-sounderpy">
 <h2>Citing SounderPy<a class="headerlink" href="#citing-sounderpy" title="Link to this heading"></a></h2>
 <blockquote>
-<div><a class="reference external image-reference" href="https://doi.org/10.5281/zenodo.10443609"><img alt="DOI" src="https://zenodo.org/badge/DOI/10.5281/zenodo.10443609.svg" />
-</a>
-<dl class="simple">
-<dt>in AMS format:</dt><dd><p>Gillett, K., 2025: SounderPy: Vertical Profile Data Retrieval &amp; Analysis Tool for Python (Version 3.0.8). Py-Pi, <a class="reference external" href="https://pypi.org/project/sounderpy/">https://pypi.org/project/sounderpy/</a></p>
-</dd>
-</dl>
-</div></blockquote>
+<div></div></blockquote>
 </section>
 <hr class="docutils" />
 <section id="references">

docs/index.html

@@ -210,7 +210,7 @@ <h1>Directory<a class="headerlink" href="#directory" title="Link to this heading
 <p class="caption" role="heading"><span class="caption-text">General:</span></p>
 <ul>
 <li class="toctree-l1"><a class="reference internal" href="about.html">📖 About</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="about.html#sounderpy-a-sounding-visualization-tool-for-severe-weather-analysis-and-forecasting">SounderPy: A sounding visualization tool for severe-weather analysis and forecasting</a></li>
+<li class="toctree-l2"><a class="reference internal" href="about.html#sounderpy-an-atmospheric-sounding-visualization-and-analysis-tool-for-python">SounderPy: An atmospheric sounding visualization and analysis tool for Python</a></li>
 <li class="toctree-l2"><a class="reference internal" href="about.html#installation">Installation</a></li>
 <li class="toctree-l2"><a class="reference internal" href="about.html#sample-basic-use">Sample Basic Use</a></li>
 <li class="toctree-l2"><a class="reference internal" href="about.html#authors-and-contributors">Authors and Contributors</a></li>