fixed conflict packages

Author: hephaex

vendor/ngc-tensorflow/Dockerfile.22.03-tf2-py3

@@ -165,6 +165,48 @@ COPY ./requirements.22.03.txt /tmp/requirements.txt
 RUN python3 -m pip install --no-cache-dir -r requirements.txt && \
     rm -f /tmp/*.whl /tmp/requirements.txt
 
+# install bashtop
+WORKDIR /tmp
+RUN git clone https://github.com/aristocratos/bashtop.git && \
+    cd bashtop && \
+    make install
+
+# install git-lfs
+WORKDIR /tmp
+RUN curl -sLO https://github.com/git-lfs/git-lfs/releases/download/v3.1.2/git-lfs-linux-amd64-v3.1.2.tar.gz && \
+    tar -zxf git-lfs-linux-amd64-v3.1.2.tar.gz && \
+    bash install.sh && \
+    rm -rf /tmp/*
+
+RUN curl -fL https://github.com/cdr/code-server/releases/download/v4.0.2/code-server-4.0.2-linux-amd64.tar.gz | tar -C /usr/local/lib -xz && \
+    mv /usr/local/lib/code-server-4.0.2-linux-amd64 /usr/local/lib/code-server-3.12.0 && \
+    ln -s /usr/local/lib/code-server-4.0.2/bin/code-server /usr/local/bin/code-server
+
+# Install Open MPI
+RUN mkdir /tmp/openmpi && \
+    cd /tmp/openmpi && \
+    wget https://download.open-mpi.org/release/open-mpi/v4.1/openmpi-4.1.1.tar.gz && \
+    tar zxf openmpi-4.1.1.tar.gz && \
+    cd openmpi-4.1.1 && \
+    ./configure --enable-orterun-prefix-by-default && \
+    make -j $(nproc) all && \
+    make install && \
+    ldconfig && \
+    rm -rf /tmp/openmpi*
+# Create a wrapper for OpenMPI to allow running as root by default
+RUN mv /usr/local/bin/mpirun /usr/local/bin/mpirun.real && \
+    echo '#!/bin/bash' > /usr/local/bin/mpirun && \
+    echo 'mpirun.real --allow-run-as-root "$@"' >> /usr/local/bin/mpirun && \
+    chmod a+x /usr/local/bin/mpirun
+
+# Configure OpenMPI to run good defaults:
+RUN echo "btl_tcp_if_exclude = lo,docker0" >> /usr/local/etc/openmpi-mca-params.conf
+
+RUN python3 -m pip install --no-cache-dir \
+    	    mpi4py==3.1.3 \
+	    nni==2.6.1 \
+	    mlflow==1.24.0 \
+	    scikit-nni==0.2.1
 
 # Install Jupyterlab extensions
 RUN jupyter nbextensions_configurator enable && \
@@ -177,7 +219,8 @@ RUN jupyter nbextensions_configurator enable && \
     jupyter labextension install --no-build @jupyterlab/toc && \
     jupyter nbextension enable execute_time/ExecuteTime && \
     jupyter nbextension enable toc2/main && \
-    jupyter lab build
+    jupyter labextension install @jupyterlab/toc && \
+    jupyter lab build    
 
 RUN apt autoclean && \
     sed -i 's/source \/usr\/local\/nvm\/nvm.sh//' /etc/bash.bashrc && \
@@ -192,7 +235,7 @@ RUN /usr/bin/python3 -m ipykernel install --display-name "Python 3.8 (NGC 22.03
 
 # Backend.AI specifics
 COPY ./service-defs /etc/backend.ai/service-defs
-COPY runner-scripts/bootstrap.sh runner-scripts/setup_multinode.py /opt/container/
+COPY ./runner-scripts/bootstrap.sh runner-scripts/setup_multinode.py /opt/container/
 LABEL ai.backend.kernelspec="1" \
       ai.backend.envs.corecount="OPENBLAS_NUM_THREADS,OMP_NUM_THREADS,NPROC" \
       ai.backend.features="batch query uid-match user-input" \