clean up

Author: hephaex

vendor/ngc-pytorch/Dockerfile.21.07-py3

@@ -18,6 +18,7 @@ RUN apt-get update && \
 	fonts-nanum \
 	fonts-nanum-coding \
 	fonts-nanum-extra \
+	pdsh \
 	gfortran \
 	htop \
 	ffmpeg \
@@ -125,18 +126,20 @@ RUN /opt/conda/bin/python3 -m pip install --no-cache-dir \
 	    typeguard==2.11.1 \
 	    python-language-server[all] \	    
 	    matplotlib==3.4.1
-ENV SCIPY_VERSION 1.6.3
+ENV SCIPY_VERSION 1.7.1
 # Install scipy
 RUN cd /tmp && \
     git clone --branch=v${SCIPY_VERSION} --depth=1 https://github.com/scipy/scipy.git scipy && \
     cd scipy && \
-    git checkout -b v${SCIPY_VERSION} && \  
+    git checkout -b v${SCIPY_VERSION} && \
+    git submodule update --init && \
     cp site.cfg.example site.cfg && \
     python3 -m pip install -U --no-cache-dir \
-	numpy==1.20.2 \
-	pandas==1.2.4 \
-        scikit-learn==0.24.1 \
-	hypothesis==6.8.5 \
+	numpy==1.21.1 \
+	pandas==1.3.3 \
+	pythran \
+        scikit-learn==1.0 \
+	hypothesis==6.23.2 \
 	python-lsp-server \
 	&& \
     python3 setup.py install 
@@ -158,9 +161,9 @@ RUN git clone https://github.com/aristocratos/bashtop.git && \
     cd bashtop && \
     make install
 
-RUN curl -fL https://github.com/cdr/code-server/releases/download/v3.11.0/code-server-3.11.0-linux-amd64.tar.gz | tar -C /usr/local/lib -xz && \
-    mv /usr/local/lib/code-server-3.11.0-linux-amd64 /usr/local/lib/code-server-3.11.0 && \
-    ln -s /usr/local/lib/code-server-3.11.0/bin/code-server /usr/local/bin/code-server
+RUN curl -fL https://github.com/cdr/code-server/releases/download/v3.12.0/code-server-3.12.0-linux-amd64.tar.gz | tar -C /usr/local/lib -xz && \
+    mv /usr/local/lib/code-server-3.12.0-linux-amd64 /usr/local/lib/code-server-3.12.0 && \
+    ln -s /usr/local/lib/code-server-3.12.0/bin/code-server /usr/local/bin/code-server
 
 # Install Open MPI
 RUN mkdir /tmp/openmpi && \
@@ -237,7 +240,5 @@ LABEL ai.backend.kernelspec="1" \
       ai.backend.runtime-path="/opt/conda/bin/python3" \
       ai.backend.service-ports="ipython:pty:3000,jupyter:http:8091,jupyterlab:http:8090,vscode:http:8180,tensorboard:http:6006,mlflow-ui:preopen:5000,nniboard:preopen:8080"
 
-RUN python3 -m spacy download en_core_web_sm && \
-    python3 -m spacy project clone pipelines/tagger_parser_predicted_annotations
 WORKDIR /home/work
 # vim: ft=dockerfile