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correctly typeset Angstrom symbol and silence LaTeX warnings
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lammps-tutorials.tex

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@@ -3634,7 +3634,7 @@ \subsubsection{Method 1: Free sampling}
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\includegraphics[width=\linewidth]{US-potential}
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\caption{Potential $U$ given in Eq.\,\eqref{eq:U} (a) and force $F$ given in
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Eq.\,\eqref{eq:F} (b) as functions of the coordinate $x$. Here,
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$U_0 = 0.36~\text{kcal/mol}$, $\delta = 1.0~\mathrm{\AA{}}$, and $x_0 = 10~\mathrm{\AA{}}$.}
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$U_0 = 0.36~\text{kcal/mol}$, $\delta = 1.0~\text{\AA{}}$, and $x_0 = 10~\text{\AA{}}$.}
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\label{fig:potential}
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\end{figure}
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@@ -3714,7 +3714,7 @@ \subsubsection{Method 1: Free sampling}
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\caption{Evolution of the number of atoms $n_\text{center}$ in the central
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region \lmpcmd{mymes} as a function of time $t$ during equilibration. The dark line
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is $n_\text{center} = 22 \exp(-t/160)+5$ and serves as a guide for the eyes. Here, $U_0 = 0.36~\text{kcal/mol}$,
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$\delta = 0.5~\mathrm{\AA{}}$, and $x_0 = 5~\mathrm{\AA{}}$.}
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$\delta = 0.5~\text{\AA{}}$, and $x_0 = 5~\text{\AA{}}$.}
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\label{fig:US-density-evolution}
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\end{figure}
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@@ -3739,7 +3739,7 @@ \subsubsection{Method 1: Free sampling}
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step of \hyperref[umbrella-sampling-label]{Tutorial 7}.
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The atoms density is the lowest in the central
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part of the box, \lmpcmd{mymes}. Here,
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$U_0 = 0.36~\text{kcal/mol}$, $\delta = 1.0~\mathrm{\AA{}}$, and $x_0 = 10~\mathrm{\AA{}}$.}
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$U_0 = 0.36~\text{kcal/mol}$, $\delta = 1.0~\text{\AA{}}$, and $x_0 = 10~\text{\AA{}}$.}
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\label{fig:US-system-unbiased}
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\end{figure}
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@@ -3749,7 +3749,7 @@ \subsubsection{Method 1: Free sampling}
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\caption{a) Fluid density $\rho$ along the $x$ direction.
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b) Potential $U$ as a function of $x$ measured using free sampling (blue disks)
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compared to the imposed potential given in Eq.\,\eqref{eq:U} (dark line).
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Here, $U_0 = 0.36~\text{kcal/mol}$, $\delta = 1.0~\mathrm{\AA{}}$, $x_0 = 10~\mathrm{\AA{}}$,
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Here, $U_0 = 0.36~\text{kcal/mol}$, $\delta = 1.0~\text{\AA{}}$, $x_0 = 10~\text{\AA{}}$,
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and the measured reference density in the reservoir is $\rho_\text{bulk} = 0.0009~\text{\AA{}}^{-3}$.} % SG: check units of rho bulk
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\label{fig:US-density}
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\end{figure}
@@ -3855,7 +3855,7 @@ \subsubsection{Method 2: Umbrella sampling}
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step of \hyperref[umbrella-sampling-label]{Tutorial 7}, showing type-1 atoms
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in cyan and the type-2 atom in red. Only the type-2 atom explores the central part of the box,
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\lmpcmd{mymes}, due to the additional biasing potential $V$. Parmaeters are
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$U_0 = 2.38~\text{kcal/mol}$, $\delta = 1.0~\mathrm{\AA{}}$, and $x_0 = 10~\mathrm{\AA{}}$.}
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$U_0 = 2.38~\text{kcal/mol}$, $\delta = 1.0~\text{\AA{}}$, and $x_0 = 10~\text{\AA{}}$.}
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\label{fig:US-system-biased}
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\end{figure}
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@@ -3882,7 +3882,7 @@ \subsubsection{Method 2: Umbrella sampling}
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The \lmpcmd{spring} command imposes the additional harmonic potential $V$ with
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the previously defined spring constant $k$. The center of the harmonic
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potential, $x_\text{des}$, successively takes values
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from $-28\,\mathrm{\AA}$ to $28\,\mathrm{\AA}$. For each value of $x_\text{des}$,
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from $-28\,\text{\AA}$ to $28\,\text{\AA}$. For each value of $x_\text{des}$,
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an equilibration step of 40\,ps is performed, followed by a step
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of 400\,ps during which the position of the particle of
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type 2 along the $x$-axis, $x_\text{ave}$, is saved in data files named \flecmd{umbrella-sampling.i.dat},
@@ -3930,8 +3930,8 @@ \subsubsection{Method 2: Umbrella sampling}
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\includegraphics[width=\linewidth]{US-free-energy}
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\caption{The potential $U$ as a function of $x$, measured using umbrella sampling
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(blue disks), is compared to the imposed potential given in Eq.\,\eqref{eq:U}
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(dark line). Parameters are $U_0 = 2.38~\text{kcal/mol}$, $\delta = 1.0~\mathrm{\AA{}}$,
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and $x_0 = 10~\mathrm{\AA{}}$.}
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(dark line). Parameters are $U_0 = 2.38~\text{kcal/mol}$, $\delta = 1.0~\text{\AA{}}$,
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and $x_0 = 10~\text{\AA{}}$.}
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\label{fig:US-freenergy}
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\end{figure}
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@@ -4181,7 +4181,7 @@ \subsubsection{Simulating the reaction}
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}
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With the \textit{stabilization} keyword, the \textit{bond/react} command will
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try to stabilize the atoms involved in the reaction using the nve/limit
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command with a maximum displacement of $0.03\,\mathrm{\AA{}}$ (a command that was
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command with a maximum displacement of $0.03\,\text{\AA{}}$ (a command that was
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used, for instance, in \hyperref[sheared-confined-label]{Tutorial 4}). The two
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\textit{react} keywords contain specific details about the two reactions
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involved here, i.e. a transformation of \textit{mol1} into \textit{mol2} based

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