Merge pull request #32 from lammpstutorials/improve-tutorial-3

Homogenize and clean tutorial 3

Author: simongravelle

figures/PEG-density.png

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+# LAMMPS Tutorial manifest file. This file determines what is downloaded when.
+# comments start with a # as the first character.
+# comments and empty lines are ignored
+##############################################################################
+# 1) input file templates and data files
+# the first file will be automatically loaded
+peg.mol
+water.mol
+parameters.inc
+water.lmp
+merge.lmp
+pull.lmp
+
+# 2) solution files
+# only downloaded on request
+solution/parameters.inc
+solution/peg.mol
+solution/water.lmp
+solution/water.mol
+solution/water.restart
+solution/water.log
+solution/water.png
+solution/merge.lmp
+solution/merge.restart
+solution/merge.log
+solution/merge.png
+solution/pull.lmp
+solution/pull.log
+solution/pull.png
+
+# 3) support files
+

figures/PEG-distance.png

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+
+read_restart water.restart