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files/tutorial5/solution/deform.data

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units real
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atom_style full
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read_data relax.data
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mass Si 28.0855
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mass O 15.999
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pair_style reaxff NULL safezone 3.0 mincap 150
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pair_coeff * * reaxCHOFe.inc Si O
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fix myqeq all qeq/reaxff 1 0.0 10.0 1.0e-6 reaxff maxiter 400
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group grpSi type Si
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group grpO type O
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variable qSi equal charge(grpSi)/count(grpSi)
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variable qO equal charge(grpO)/count(grpO)
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thermo 200
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thermo_style custom step temp etotal press vol v_qSi v_qO
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dump viz all image 200 myimage-*.ppm type type &
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shiny 0.1 box no 0.01 view 0 90 zoom 2.5 size 1000 500
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dump_modify viz backcolor white acolor Si yellow &
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adiam Si 2.5 acolor O red adiam O 2
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dump dmp all custom 200 deform.lammpstrj id typelabel q x y z
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fix myspec all reaxff/species 5 1 5 deform.species element Si O
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fix mynvt all nvt temp 300.0 300.0 100
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timestep 0.5
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run 5000
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fix mydef all deform 1 x erate 5e-5
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run 25000
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write_data deform.data
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../reaxCHOFe.inc

files/tutorial5/solution/relax.data

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