trigger workflow.

- User `vars` to access environment variable

Author: ajtritt

.github/workflows/jamo-deploy.yml

@@ -27,7 +27,7 @@ jobs:
       uses: docker/login-action@v3
       with:
         registry: registry.nersc.gov
-        username: ${{ env.REGISTRY_USERNAME }}
+        username: ${{ vars.REGISTRY_USERNAME }}
         password: ${{ secrets.REGISTRY_PASSWORD }}
 
     - name: Build and push image

data_management/jamo/jat/src/jat/analysis.py

@@ -281,6 +281,7 @@ class Analysis(MongoRestful):
                            'Resequencing']
 
     def __init__(self, config=None):
+
         # config should be required, but when config added, needed to default to None
         if config is not None:
             self.config = config