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OsHCuellarOsHCuellar
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Instructions update
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‎user_templates/INST.j2‎

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{% if step==1 %}
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{% set kbdVar="auto" %}
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{% set ssVar="hidden" %}
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<ul style="color: black; text-align: justify;">
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{% else %}
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{% set kbdVar="hidden" %}
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{% set ssVar="auto" %}
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<ul style="color: Gray; text-align: justify;">
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{% endif %}
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<li>
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Upload the input file, select its corresponding file format, and press
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<kbd {{kbdVar}}>Calculate my structure</kbd>
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<strong {{ssVar}}><samp {{ssVar}}>Calculate my structure</samp></strong>
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.
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</li>
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</ul>
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</br>
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{% if step==2 %}
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{% set kbdVar="auto" %}
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{% set ssVar="hidden" %}
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<ul style="color: black; text-align: justify;">
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{% else %}
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{% set kbdVar="hidden" %}
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{% set ssVar="auto" %}
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<ul style="color: Gray; text-align: justify;">
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{% endif %}
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<li>
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If the input file was imported and interpreted successfully, you will be able to view basic structure information under
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the
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<kbd {{kbdVar}}>Structure information</kbd>
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<strong {{ssVar}}><samp {{ssVar}}>Structure information</samp></strong>
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tab. Press
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<kbd {{kbdVar}}>Run cell2mol</kbd>
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<strong {{ssVar}}><samp {{ssVar}}>Run cell2mol</samp></strong>
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and wait.
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The waiting time depends on the structure size and complexity.
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</li>
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</ul>
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</br>
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{% if step==3 %}
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{% set kbdVar="auto" %}
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{% set ssVar="hidden" %}
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<ul style="color: black; text-align: justify;">
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{% else %}
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{% set kbdVar="hidden" %}
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{% set ssVar="auto" %}
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<ul style="color: Gray; text-align: justify;">
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{% endif %}
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<li>
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If the structure was analyzed successfully, you will be able to view its analysis under the
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<kbd {{kbdVar}}>Structure analysis</kbd>
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<strong {{ssVar}}><samp {{ssVar}}>Structure analysis</strong></samp>
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tab. You can download the cell object in <i>.gmol</i> format by pressing
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<kbd {{kbdVar}}>Download cell (.gmol)</kbd>
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<strong {{ssVar}}><samp {{ssVar}}>Download cell (.gmol)</strong></samp>
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. Press
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<kbd {{kbdVar}}>View structure</kbd>
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<strong {{ssVar}}><samp {{ssVar}}>View structure</strong></samp>
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to view, interact and download specific molecules or complexes.
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</li>
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</ul>
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</br>
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{% if step==4 %}
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{% set kbdVar="auto" %}
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{% set ssVar="hidden" %}
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<ul style="color: black; text-align: justify;">
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{% else %}
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{% set kbdVar="hidden" %}
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{% set ssVar="auto" %}
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<ul style="color: Gray; text-align: justify;">
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{% endif %}
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<li>
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By double-clicking on the 3d structure you will be able to zoom in, zoom out, and rotate the model. On the left column,
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you can select which molecular components (ligands, molecules, or metals) are displayed. Below the 3d structure, you will find a toggle
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button to select if you want to view the cell or one mol (molecule or complex). When mol is selected, you can use the
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dropdown menu to choose one to visualize. The xyz file of the selected mol containing
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charge, spin, and cartesian coordinates (ready for quantum chemical calculations), can be downloaded by clicking
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<kbd {{kbdVar}}>Download selected mol (.xyz)</kbd>
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<strong {{ssVar}}><samp {{ssVar}}>Download selected mol (.xyz)</strong></samp>
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.
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</li>
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</ul>
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<p style="text-align: justify;">
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{% if step==-1 %}
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<span style="color:red">
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{% else %}
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<span>
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{% endif %}
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If one of the steps fail, please verify your input file or try to use a different cif2cell version if using info file as input.
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</span>
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</p>
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‎user_templates/c2m-analysis.html‎

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@@ -70,51 +70,11 @@ <h2>Structure {{struct_name}} analized and converted successfully</h2>
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<h2>Instructions</h2>
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<div>
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</br>
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<ul style="color: DimGray; text-align: justify;">
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<li>
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Upload the input file, select its corresponding file format, and press <strong><samp>Calculate my structure</strong></samp>.
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</li>
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</br>
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<li>
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If the input file was imported and interpreted successfully, you will be able to view basic structure information under
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the <strong><samp>Structure information</strong></samp> tab. Press <strong><samp>Run cell2mol</strong></samp> and wait.
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The waiting time depends on the structure size and complexity.
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</li>
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</ul>
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</br>
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<ul style="color: blue; text-align: justify;">
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<li>
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<span style="color:black">
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If the structure was analyzed successfully, you will be able to view its analysis under the <kbd>Structure analysis</kbd>
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tab. You can download the cell object in <i>.gmol</i> format by pressing <kbd>Download cell (.gmol)</kbd>.
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Press <kbd>View structure</kbd> to view, interact and download specific molecules or complexes.
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</span>
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</li>
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</ul>
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</br>
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<ul style="color: Gray; text-align: justify;">
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<li>
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By double-clicking on the 3d structure you will be able to zoom in, zoom out, and rotate the model. On the left column,
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you can select which molecular components (ligands, molecules, or metals) are displayed. Below the 3d structure, you will find a toggle
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button to select if you want to view the cell or one mol (molecule or complex). When mol is selected, you can use the
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dropdown menu to choose one to visualize. The xyz file of the selected mol containing
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charge, spin, and cartesian coordinates (ready for quantum chemical calculations), can be downloaded by clicking <strong><samp>Download selected
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mol (.xyz)</strong></samp>.
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</li>
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</ul>
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<p style="text-align: justify;">
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If one of the steps fail, please verify your input file or try to use a different cif2cell version if using info file as input.
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</p>
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{% with step=3 %}
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{% include 'user_templates/INST.j2' %}
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{% endwith %}
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</div>
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‎user_templates/c2m-debug.html‎

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<div>
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</br>
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<ul style="color: black; text-align: justify;">
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<li>
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Upload the input file, select its corresponding file format, and press <strong><samp>Calculate my structure</strong></samp>.
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</li>
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</br>
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<li>
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If the input file was imported and interpreted successfully, you will be able to view basic structure information under
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the <strong><samp>Structure information</strong></samp> tab. Press <strong><samp>Run cell2mol</strong></samp> and wait.
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The waiting time depends on the structure size and complexity.
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</li>
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</br>
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<li>
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If the structure was analyzed successfully, you will be able to view its analysis under the <strong><samp>Structure analysis</strong></samp>
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tab. You can download the cell object in <i>.gmol</i> format by pressing <strong><samp>Download cell (.gmol)</strong></samp>.
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Press <strong><samp>View structure</strong></samp> to view, interact and download specific molecules or complexes.
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</li>
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</br>
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<li>
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By double-clicking on the 3d structure you will be able to zoom in, zoom out, and rotate the model. On the left column,
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you can select which molecular components (ligands, molecules, or metals) are displayed. Below the 3d structure, you will find a toggle
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button to select if you want to view the cell or one mol (molecule or complex). When mol is selected, you can use the
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dropdown menu to choose one to visualize. The xyz file of the selected mol containing
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charge, spin, and cartesian coordinates (ready for quantum chemical calculations), can be downloaded by clicking <strong><samp>Download selected
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mol (.xyz)</strong></samp>.
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</li>
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</ul>
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<p style="text-align: justify;">
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<span style="color:red">
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<strong>
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If one of the steps fail, please verify your input file or try to use a different cif2cell version if using info file as input.
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</strong>
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</span>
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</p>
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{% with step=-1 %}
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{% include 'user_templates/INST.j2' %}
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{% endwith %}
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</div>
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‎user_templates/c2m-infopage.html‎

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@@ -149,51 +149,11 @@ <h2>Structure {{struct_name}} imported successfully</h2>
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<h2>Instructions</h2>
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<div>
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</br>
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<ul style="color: DimGray; text-align: justify;">
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<li>
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Upload the input file, select its corresponding file format, and press <strong><samp>Calculate my structure</strong></samp>.
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</li>
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</ul>
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</br>
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<ul style="color: blue; text-align: justify;">
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<li>
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<span style="color:black">
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If the input file was imported and interpreted successfully, you will be able to view basic structure information under
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the <kbd>Structure information</kbd> tab. Press <kbd>Run cell2mol</kbd> and wait.
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The waiting time depends on the structure size and complexity.
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</span>
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</li>
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</ul>
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</br>
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<ul style="color: Gray; text-align: justify;">
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<li>
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If the structure was analyzed successfully, you will be able to view its analysis under the <strong><samp>Structure analysis</strong></samp>
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tab. You can download the cell object in <i>.gmol</i> format by pressing <strong><samp>Download cell (.gmol)</strong></samp>.
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Press <strong><samp>View structure</strong></samp> to view, interact and download specific molecules or complexes.
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</li>
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</br>
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<li>
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By double-clicking on the 3d structure you will be able to zoom in, zoom out, and rotate the model. On the left column,
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you can select which molecular components (ligands, molecules, or metals) are displayed. Below the 3d structure, you will find a toggle
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button to select if you want to view the cell or one mol (molecule or complex). When mol is selected, you can use the
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dropdown menu to choose one to visualize. The xyz file of the selected mol containing
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charge, spin, and cartesian coordinates (ready for quantum chemical calculations), can be downloaded by clicking <strong><samp>Download selected
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mol (.xyz)</strong></samp>.
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</li>
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</ul>
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{% with step=2 %}
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{% include 'user_templates/INST.j2' %}
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{% endwith %}
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<p style="text-align: justify;">
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If one of the steps fail, please verify your input file or try to use a different cif2cell version if using info file as input.
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</p>
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</div>
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‎user_templates/c2m-view.html‎

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@@ -82,48 +82,10 @@ <h2>Structure {{struct_name}} on display</h2>
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<h2>Instructions</h2>
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<div>
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</br>
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<ul style="color: DimGray; text-align: justify;">
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<li>
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Upload the input file, select its corresponding file format, and press <strong><samp>Calculate my structure</strong></samp>.
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</li>
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</br>
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<li>
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If the input file was imported and interpreted successfully, you will be able to view basic structure information under
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the <strong><samp>Structure information</strong></samp> tab. Press <strong><samp>Run cell2mol</strong></samp> and wait.
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The waiting time depends on the structure size and complexity.
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</li>
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</br>
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<li>
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If the structure was analyzed successfully, you will be able to view its analysis under the <strong><samp>Structure analysis</strong></samp>
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tab. You can download the cell object in <i>.gmol</i> format by pressing <strong><samp>Download cell (.gmol)</strong></samp>.
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Press <strong><samp>View structure</strong></samp> to view, interact and download specific molecules or complexes.
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</li>
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</ul>
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</br>
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<ul style="color: blue; text-align: justify;">
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<li>
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<span style="color:black">
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By double-clicking on the 3d structure you will be able to zoom in, zoom out, and rotate the model. On the left column,
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you can select which molecular components (ligands, molecules, or metals) are displayed. Below the 3d structure, you will find a toggle
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button to select if you want to view the cell or one mol (molecule or complex). When mol is selected, you can use the
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dropdown menu to choose one to visualize. The xyz file of the selected mol containing
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charge, spin, and cartesian coordinates (ready for quantum chemical calculations), can be downloaded by clicking <kbd>Download selected
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mol (.xyz)</kbd>.
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</span>
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</li>
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</ul>
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<p style="text-align: justify;">
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If one of the steps fail, please verify your input file or try to use a different cif2cell version if using info file as input.
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</p>
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{% with step=4 %}
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{% include 'user_templates/INST.j2' %}
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{% endwith %}
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</div>
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