Bug fixes / simple features #842
Description
This is a catch-all for issues related to bug fixes and simple features that can be addressed now:
High priority:
- ERROR TypeError: Cannot read properties of undefined (reading 'coordinates') #424 difficult
- javascript error in console leading to perpetual wait for search results in alignment pipeline #420 difficult
- add ability to search for gene(s) in current view #9 medium
Medium priority:
- Implement scroll-to behavior in legends #836 medium
- Auto-resize legend column #766 easy
- Drop jQuery dependency #393 easy
- Circles in dotplots represent pairs of genes and should get info regarding both in the tooltip #370 easy (could be used to add pair-wise links to JBrowse)
- re-add support for "scrolling" in microview #384 medium
- specifying source in search UI does not produce expected effect #380 medium
- CNV-induced inversions #340 medium
- Visualization click during hover causes "dangling selections" #335 medium
- GCV2 multi-comparison making segmental duplications out of short contigs? #327 medium
- Macro synteny control options from GCV1 #299 medium
- make option for not performing track querying (ie support for old multi-view behavior) #298 easy
- allow user to hide pipeline representation after successful completion? #272 easy
- investigate conditions under which inversions not represented in macrosynteny blocks #128 medium
- Add multiple alignment algorithm to search view #103 medium
Low priority:
- revive GCV1-era list of datasource descriptions in instructions page #838 easy
- Macro-synteny highlight behavior #837 easy
- consider adding ability to multi-select from region search results as is done for gene search results #339 medium
- could search results show the pairing of query terms with the matches they engendered? #338 easy
- Implement (support for) gene family linkout service #290 easy
- Parameter sensative alignment scores #163 easy
- Update manuscript links #849 easy
- Remove remaing tour code #851 easy