Merge branch 'bounlut push origin master-master'

lh3 · lh3 · commit 7110ada21a8f · 2025-03-21T15:56:31.000-04:00
diff --git a/bwtindex.c b/bwtindex.c
@@ -239,7 +239,7 @@ int bwa_index(int argc, char *argv[]) // the "index" command
 		fprintf(stderr, "         -6        index files named as <in.fasta>.64.* instead of <in.fasta>.* \n");
 		fprintf(stderr, "\n");
 		fprintf(stderr,	"Warning: `-a bwtsw' does not work for short genomes, while `-a is' and\n");
-		fprintf(stderr, "         `-a div' do not work not for long genomes.\n\n");
+		fprintf(stderr, "         `-a div' do not work for long genomes.\n\n");
 		return 1;
 	}
 	if (prefix == 0) {

Original file line number	Diff line number	Diff line change
`@@ -239,7 +239,7 @@ int bwa_index(int argc, char *argv[]) // the "index" command`
`239`	`239`	`fprintf(stderr, " -6 index files named as <in.fasta>.64.* instead of <in.fasta>.* \n");`
`240`	`240`	`fprintf(stderr, "\n");`
`241`	`241`	fprintf(stderr, "Warning: `-a bwtsw' does not work for short genomes, while `-a is' and\n");
`242`		- fprintf(stderr, " `-a div' do not work not for long genomes.\n\n");
	`242`	+ fprintf(stderr, " `-a div' do not work for long genomes.\n\n");
`243`	`243`	`return 1;`
`244`	`244`	`}`
`245`	`245`	`if (prefix == 0) {`