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35 | 35 | #include <queso/LikelihoodBase.h> |
36 | 36 | #include <queso/UniformVectorRV.h> |
37 | 37 | #include <queso/1DQuadrature.h> |
| 38 | +#include <queso/GaussianVectorRV.h> |
38 | 39 |
|
39 | 40 | #include <queso/GslVector.h> |
40 | 41 | #include <queso/GslMatrix.h> |
@@ -120,6 +121,46 @@ namespace QUESOTesting |
120 | 121 |
|
121 | 122 | }; |
122 | 123 |
|
| 124 | + template <class V, class M> |
| 125 | + class GaussModelLikelihood : public TestlingLikelihoodBase<V,M> |
| 126 | + { |
| 127 | + public: |
| 128 | + |
| 129 | + GaussModelLikelihood(const char * prefix, |
| 130 | + const QUESO::VectorSet<V, M> & domainSet, |
| 131 | + const V & observations, |
| 132 | + typename QUESO::SharedPtr<QUESO::BaseVectorRV<V,M> >::Type & marg_param_pdf, |
| 133 | + typename QUESO::SharedPtr<QUESO::MultiDQuadratureBase<V,M> >::Type & marg_integration, |
| 134 | + bool marg_pdf_is_weight_func) |
| 135 | + : TestlingLikelihoodBase<V,M>(prefix,domainSet,observations,marg_param_pdf,marg_integration,marg_pdf_is_weight_func) |
| 136 | + {} |
| 137 | + |
| 138 | + virtual void evaluateModel(const V & domainVector, |
| 139 | + const V & marginalVector, |
| 140 | + V & modelOutput) const |
| 141 | + { |
| 142 | + queso_require_equal_to(1,domainVector.sizeGlobal()); |
| 143 | + queso_require_equal_to(2,marginalVector.sizeGlobal()); |
| 144 | + queso_require_equal_to(1,modelOutput.sizeGlobal()); |
| 145 | + |
| 146 | + double q1 = marginalVector[0]; |
| 147 | + double q2 = marginalVector[1]; |
| 148 | + double m = domainVector[0]; |
| 149 | + |
| 150 | + modelOutput[0] = 3.14*m + 1.1*q1 + 2.2*q2*q2; |
| 151 | + } |
| 152 | + |
| 153 | + virtual double lnMargLikelihood( const V & domainVector ) const |
| 154 | + { |
| 155 | + queso_require_equal_to(1,domainVector.sizeGlobal()); |
| 156 | + |
| 157 | + double m = domainVector[0]; |
| 158 | + |
| 159 | + return std::log(3.14*m*M_PI + 2.2*M_PI/2.0); |
| 160 | + } |
| 161 | + |
| 162 | + }; |
| 163 | + |
123 | 164 | template <class V, class M> |
124 | 165 | class MarginalLikelihoodTestBase : public CppUnit::TestCase |
125 | 166 | { |
@@ -184,6 +225,64 @@ namespace QUESOTesting |
184 | 225 | param_space, tol, likelihood ); |
185 | 226 | } |
186 | 227 |
|
| 228 | + void test_linear_func_gaussian_marg_space() |
| 229 | + { |
| 230 | + // Instantiate the parameter space |
| 231 | + unsigned int param_dim = 1; |
| 232 | + unsigned int marg_dim = 2; |
| 233 | + QUESO::VectorSpace<V,M> param_space( (*this->_env), "param_", param_dim, NULL); |
| 234 | + QUESO::VectorSpace<V,M> marg_space( (*this->_env), "marg_", marg_dim, NULL); |
| 235 | + |
| 236 | + double param_min_domain_value = 0.0; |
| 237 | + double param_max_domain_value = 1.0; |
| 238 | + |
| 239 | + double marg_min_domain_value = -INFINITY; |
| 240 | + double marg_max_domain_value = INFINITY; |
| 241 | + |
| 242 | + typename QUESO::ScopedPtr<V>::Type param_min_values( param_space.newVector(param_min_domain_value) ); |
| 243 | + typename QUESO::ScopedPtr<V>::Type param_max_values( param_space.newVector(param_max_domain_value) ); |
| 244 | + |
| 245 | + typename QUESO::ScopedPtr<V>::Type marg_min_values( marg_space.newVector(marg_min_domain_value) ); |
| 246 | + typename QUESO::ScopedPtr<V>::Type marg_max_values( marg_space.newVector(marg_max_domain_value) ); |
| 247 | + |
| 248 | + QUESO::BoxSubset<V,M> param_domain( "param_domain_", param_space, (*param_min_values), (*param_max_values) ); |
| 249 | + QUESO::BoxSubset<V,M> marg_domain( "marg_domain_", marg_space, (*marg_min_values), (*marg_max_values) ); |
| 250 | + |
| 251 | + typename QUESO::ScopedPtr<V>::Type var_vec( param_space.newVector(1.0) ); |
| 252 | + |
| 253 | + // Zero mean, unit variance Gaussian |
| 254 | + typename QUESO::SharedPtr<QUESO::BaseVectorRV<V,M> >::Type |
| 255 | + marg_param_rv( new QUESO::GaussianVectorRV<V,M>("marg_param_rv_", marg_domain, |
| 256 | + marg_space.zeroVector(), |
| 257 | + *var_vec) ); |
| 258 | + |
| 259 | + const V & data = param_space.zeroVector(); |
| 260 | + |
| 261 | + unsigned int int_order = 1; |
| 262 | + |
| 263 | + QUESO::SharedPtr<QUESO::Base1DQuadrature>::Type |
| 264 | + qrule_1d( new QUESO::GaussianHermite1DQuadrature(0.0,1.0,int_order) ); |
| 265 | + |
| 266 | + std::vector<QUESO::SharedPtr<QUESO::Base1DQuadrature>::Type> all_1d_qrules(marg_dim,qrule_1d); |
| 267 | + |
| 268 | + typename QUESO::SharedPtr<QUESO::MultiDQuadratureBase<V,M> >::Type |
| 269 | + marg_integration( new QUESO::TensorProductQuadrature<V,M>(marg_domain,all_1d_qrules) ); |
| 270 | + |
| 271 | + GaussModelLikelihood<V,M> likelihood( "likelihood_test_", |
| 272 | + param_domain, |
| 273 | + data, |
| 274 | + marg_param_rv, |
| 275 | + marg_integration, |
| 276 | + true ); |
| 277 | + |
| 278 | + // Test marginalized likelihood over a range of points in the parameter domain |
| 279 | + unsigned int n_intervals = 20; |
| 280 | + double tol = std::numeric_limits<double>::epsilon()*50; |
| 281 | + |
| 282 | + this->test_likelihood_values_range( n_intervals, param_min_domain_value, param_max_domain_value, |
| 283 | + param_space, tol, likelihood ); |
| 284 | + } |
| 285 | + |
187 | 286 | protected: |
188 | 287 |
|
189 | 288 | QUESO::EnvOptionsValues _options; |
@@ -216,6 +315,7 @@ namespace QUESOTesting |
216 | 315 | CPPUNIT_TEST_SUITE( MarginalLikelihoodGslTest ); |
217 | 316 |
|
218 | 317 | CPPUNIT_TEST( test_linear_func_uniform_marg_space ); |
| 318 | + CPPUNIT_TEST( test_linear_func_gaussian_marg_space ); |
219 | 319 |
|
220 | 320 | CPPUNIT_TEST_SUITE_END(); |
221 | 321 | }; |
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