Use conda version of libsemigroups in the CI
#779
Workflow file for this run
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| name: Run tests and lint | |
| on: [pull_request, workflow_dispatch] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| conda-version: | |
| name: "Conda, ${{ matrix.os }}, Python ${{ matrix.python_version }}" | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python_version: ["3.9", "3.10", "3.11", "3.12", "3.13"] | |
| os: ["ubuntu-latest", "macOS-latest"] | |
| include: | |
| - os: "ubuntu-latest" | |
| compiler: "ccache g++" | |
| - os: "macOS-latest" | |
| compiler: "ccache clang++" | |
| runs-on: ${{ matrix.os }} | |
| timeout-minutes: 15 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: "Setup ccache . . ." | |
| uses: Chocobo1/setup-ccache-action@v1 | |
| with: | |
| update_packager_index: false | |
| install_ccache: true | |
| - name: "Create micromamba environment . . ." | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| environment-name: libsemigroups | |
| cache-environment: true | |
| create-args: >- | |
| python=${{ matrix.python_version }} | |
| pip | |
| libsemigroups | |
| - name: "Set environment variables . . ." | |
| run: | | |
| echo "PKG_CONFIG_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib/pkgconfig:$MAMBA_ROOT_PREFIX/envs/libsemigroups/share/pkgconfig:/usr/local/lib/pkgconfig" >> $GITHUB_ENV | |
| echo "PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/bin:$PATH" >> $GITHUB_ENV | |
| - name: "Check Python version . . ." | |
| run: | | |
| python --version | |
| pip --version | |
| - name: "Install requirements . . ." | |
| run: pip install -r requirements.txt | |
| - name: "Pip install libsemigroups_pybind11 . . ." | |
| run: | | |
| CXX="${{ matrix.compiler }}" pip install . -v | |
| ccache -s | |
| - name: "Run tests . . ." | |
| run: | | |
| python -m pytest -vv tests/test_*.py | |
| - name: "Run doc tests . . ." | |
| run: | | |
| etc/make-doc.sh # so that all files are generated! | |
| cd docs | |
| python -m sphinx -b doctest -d _build/doctrees source _build/doctest | |
| - name: "Pip install pylint + cpplint . . ." | |
| run: | | |
| pip3 install pylint cpplint | |
| - name: "Run pylint and cpplint . . ." | |
| run: | | |
| python -m pylint setup.py tests/*.py libsemigroups_pybind11/*.py | |
| python -m cpplint src/*.hpp src/*.cpp | |
| main-branch: | |
| name: "Main, ${{ matrix.os }}, Python 3.13" | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-latest", "macOS-latest"] | |
| include: | |
| - os: "ubuntu-latest" | |
| compiler: "ccache g++" | |
| - os: "macOS-latest" | |
| compiler: "ccache clang++" | |
| runs-on: ${{ matrix.os }} | |
| timeout-minutes: 15 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: "Setup ccache . . ." | |
| uses: Chocobo1/setup-ccache-action@v1 | |
| with: | |
| update_packager_index: false | |
| install_ccache: true | |
| - name: "Create micromamba environment . . ." | |
| uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| environment-name: libsemigroups | |
| cache-environment: true | |
| create-args: >- | |
| python=3.13 | |
| pip | |
| fmt | |
| eigen | |
| - name: "Set environment variables . . ." | |
| run: | | |
| echo "PKG_CONFIG_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib/pkgconfig:$MAMBA_ROOT_PREFIX/envs/libsemigroups/share/pkgconfig:/usr/local/lib/pkgconfig" >> $GITHUB_ENV | |
| echo "LD_LIBRARY_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib:/usr/local/lib:$LD_LIBRARY_PATH" >> $GITHUB_ENV | |
| echo "PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/bin:$PATH" >> $GITHUB_ENV | |
| - name: "Check Python version . . ." | |
| run: | | |
| python --version | |
| pip --version | |
| - name: "Install make requirements (Mac only) . . ." | |
| if: ${{ matrix.os == 'macOS-latest' }} | |
| run: brew install autoconf automake libtool | |
| - name: "Install libsemigroups . . ." | |
| run: | | |
| git clone --depth 1 --branch main https://github.com/libsemigroups/libsemigroups.git | |
| cd libsemigroups | |
| ./autogen.sh | |
| ./configure CXX="${{ matrix.compiler }}" CXXFLAGS="-O2 -g" --disable-hpcombi --with-external-fmt --with-external-eigen | |
| sudo make install -j8 | |
| ccache -s | |
| - name: "Install requirements libsemigroups . . ." | |
| run: pip install -r requirements.txt | |
| - name: "Pip install libsemigroups_pybind11 . . ." | |
| run: | | |
| CXX="${{ matrix.compiler }}" pip install . -v | |
| ccache -s | |
| - name: "Run tests . . ." | |
| run: | | |
| python -m pytest -vv tests/test_*.py | |
| - name: "Run doc tests . . ." | |
| run: | | |
| etc/make-doc.sh # so that all files are generated! | |
| cd docs | |
| python -m sphinx -b doctest -d _build/doctrees source _build/doctest | |
| - name: "Pip install pylint + cpplint . . ." | |
| run: | | |
| pip install pylint cpplint | |
| - name: "Run pylint and cpplint . . ." | |
| run: | | |
| python -m pylint setup.py tests/*.py libsemigroups_pybind11/*.py | |
| python -m cpplint src/*.hpp src/*.cpp |