libsemigroups_pybind11/.github/workflows/tests.yml at bb8d62066471a4aee7d5b580d7fd842af6d73dcd · libsemigroups/libsemigroups_pybind11 · GitHub

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name: Run tests and lint
on: [pull_request, workflow_dispatch]

concurrency:
  group: ${{ github.workflow }}-${{ github.ref }}
  cancel-in-progress: true

jobs:
  conda-version:
    name: "Conda, ${{ matrix.os }}, Python ${{ matrix.python_version }}"
    strategy:
      fail-fast: false
      matrix:
        python_version: ["3.9", "3.10", "3.11", "3.12", "3.13"]
        os: ["ubuntu-latest", "macOS-latest"]
        include:
          - os: "ubuntu-latest"
            compiler: "ccache g++"
          - os: "macOS-latest"
            compiler: "ccache clang++"
    runs-on: ${{ matrix.os }}
    timeout-minutes: 15
    steps:
      - uses: actions/checkout@v4
      - name: "Setup ccache . . ."
        uses: Chocobo1/setup-ccache-action@v1
        with:
          update_packager_index: false
          install_ccache: true
      # We could remove this step and instead install Python with micromamba.
      # This would mean we could avoid specifying LD_LIBRARY_PATH and LDFLAGS.
      # However, JDE thinks the current setup better reflects how a developer
      # might wish to install the package, so we have opted for this.
      - name: "Setup Python . . ."
        uses: actions/setup-python@v5
        with:
          python-version: ${{ matrix.python_version }}
          cache: "pip"
      - name: "Create micromamba environment . . ."
        uses: mamba-org/setup-micromamba@v1
        with:
          environment-name: libsemigroups
          create-args: >-
            libsemigroups
      - name: "Set environment variables . . ."
        run: |
          echo "PKG_CONFIG_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib/pkgconfig:$MAMBA_ROOT_PREFIX/envs/libsemigroups/share/pkgconfig:/usr/local/lib/pkgconfig" >> $GITHUB_ENV
          echo "LD_LIBRARY_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib:/usr/local/lib" >> $GITHUB_ENV
          echo "LDFLAGS=-Wl,-rpath,$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib" >> $GITHUB_ENV
          echo "PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/bin:$PATH" >> $GITHUB_ENV
      - name: "Check Python version . . ."
        run: |
          python --version
          pip --version
      - name: "Install requirements . . ."
        run: pip install -r requirements.txt
      - name: "Pip install libsemigroups_pybind11 . . ."
        run: |
          CXX="${{ matrix.compiler }}"  pip install . -v
      - name: "Run tests . . ."
        run: |
          python -m pytest -vv tests/test_*.py
      - name: "Run doc tests . . ."
        run: |
          etc/make-doc.sh  # so that all files are generated!
          cd docs
          python -m sphinx -b doctest -d _build/doctrees source _build/doctest
      - name: "Pip install pylint + cpplint . . ."
        run: |
          pip3 install pylint cpplint
      - name: "Run pylint and cpplint . . ."
        run: |
          python -m pylint setup.py tests/*.py libsemigroups_pybind11/*.py
          python -m cpplint src/*.hpp src/*.cpp
  main-branch:
    name: "Main, ${{ matrix.os }}, Python 3.13"
    strategy:
      fail-fast: false
      matrix:
        os: ["ubuntu-latest", "macOS-latest"]
        include:
          - os: "ubuntu-latest"
            compiler: "ccache g++"
          - os: "macOS-latest"
            compiler: "ccache clang++"
    runs-on: ${{ matrix.os }}
    timeout-minutes: 15
    steps:
      - uses: actions/checkout@v4
      - name: "Setup ccache . . ."
        uses: Chocobo1/setup-ccache-action@v1
        with:
          update_packager_index: false
          install_ccache: true
      # We could remove this step and instead install Python with micromamba.
      # This would mean we could avoid specifying LD_LIBRARY_PATH and LDFLAGS.
      # However, JDE thinks the current setup better reflects how a developer
      # might wish to install the package, so we have opted for this.
      - name: "Setup Python . . ."
        uses: actions/setup-python@v5
        with:
          python-version: 3.13
          cache: "pip"
      - name: "Create micromamba environment . . ."
        uses: mamba-org/setup-micromamba@v1
        with:
          environment-name: libsemigroups
          create-args: >-
            fmt
      - name: "Set environment variables . . ."
        run: |
          echo "PKG_CONFIG_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib/pkgconfig:$MAMBA_ROOT_PREFIX/envs/libsemigroups/share/pkgconfig:/usr/local/lib/pkgconfig" >> $GITHUB_ENV
          echo "LD_LIBRARY_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib:/usr/local/lib" >> $GITHUB_ENV
          echo "LDFLAGS=-Wl,-rpath,$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib" >> $GITHUB_ENV
          echo "PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/bin:$PATH" >> $GITHUB_ENV
      - name: "Check Python version . . ."
        run: |
          python --version
          pip --version
      - name: "Install make requirements . . ."
        if: ${{ matrix.os == 'macOS-latest' }}
        run: brew install autoconf automake libtool
      - name: "Install requirements libsemigroups . . ."
        run: pip install -r requirements.txt
      - name: "Install libsemigroups . . ."
        run: |
          git clone --depth 1 --branch main https://github.com/libsemigroups/libsemigroups.git
          cd libsemigroups
          ./autogen.sh
          ./configure CXX="${{ matrix.compiler }}" CXXFLAGS="-O2 -g" --disable-hpcombi --with-external-fmt
          sudo make install -j8
          ccache -s
      - name: "Pip install libsemigroups_pybind11 . . ."
        run: |
          CXX="${{ matrix.compiler }}"  pip install . -v
      - name: "Run tests . . ."
        run: |
          python -m pytest -vv tests/test_*.py
      - name: "Run doc tests . . ."
        run: |
          etc/make-doc.sh  # so that all files are generated!
          cd docs
          python -m sphinx -b doctest -d _build/doctrees source _build/doctest
      - name: "Pip install pylint + cpplint . . ."
        run: |
          pip install pylint cpplint
      - name: "Run pylint and cpplint . . ."
        run: |
          python -m pylint setup.py tests/*.py libsemigroups_pybind11/*.py
          python -m cpplint src/*.hpp src/*.cpp