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Ah I see... In that case you can try regenerating your issuer certs as explained here and pass them to the upgrade command along with the --set proxyInit.runAsRoot=true flag:

linkerd upgrade --identity-trust-anchors-file ca.crt   --identity-issuer-certificate-file issuer.crt   --identity-issuer-key-file issuer.key --set proxyInit.runAsRoot=true

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@aaronolds
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@aaronolds
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