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- For those who want to run RIMA on Kraken, first, use the following code to activate the RIMA environment on Kraken:
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+ For those who want to run RIMA on Kraken, ** first** , use the following code to activate the RIMA environment on Kraken:
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- export CONDA_ROOT=/liulab/linyang/rnaseq_env/miniconda3
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- export PATH=/liulab/linyang/rnaseq_env/miniconda3/bin:$PATH
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- source activate /liulab/linyang/rnaseq_env/miniconda3/envs/rnaseq
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+ ** export CONDA_ROOT=/liulab/linyang/rnaseq_env/miniconda3**
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+ ** export PATH=/liulab/linyang/rnaseq_env/miniconda3/bin:$PATH**
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+ ** source activate /liulab/linyang/rnaseq_env/miniconda3/envs/rnaseq**
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- then follow RIMA tutorial start from chapter 2.3:
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+ ** then** , follow RIMA tutorial start from chapter 2.3:
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https://liulab-dfci.github.io/RIMA/
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- Please refer to https://liulab-dfci.github.io/RIMA/
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