Skip to content

Missing plotfunctions.R from book Chapter 6 (6.7.2) #24

@slsevilla

Description

@slsevilla

Hi - Following the information listed in Chapter6.7.2 and having an issue with the code because there is no information on where 'plotfunction.R' came from. Can you provide me the location of this R file?

#load plotfunction 
source("plotfunction.R")

#load metasheet for RIMA pipeline
metasheet <- read.csv("metasheet.csv")

#methods: CIBERSORT, quanTIseq, EPIC, MCP, xCell, TIMER
hmap(ta = res_ciber, meta = metasheet, methods = "CIBERSORT", phenotype = "Responder")

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions