Skip to content

Combining Illumina and Nanopore reads #70

@irazoquimatias

Description

@irazoquimatias

Hi!

In our group we sequenced a metagenome using both Illumina and Nanopore. Our idea was to have enough short reads to get a good assembly and some long reads to use to improve it. Does IDBA_UD support this kind of hybrid assembly? My idea was to use the “--read” option for the Illumina reads and the “--long_read” option for the Nanopore reads.

Thank you in advance!!

Matias

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions