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lithomas1lucascolley
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stats fully passing
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7 files changed

+80
-23
lines changed

7 files changed

+80
-23
lines changed

scipy/_lib/_util.py

Lines changed: 4 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -128,6 +128,10 @@ def _lazywhere(cond, arrays, f, fillvalue=None, f2=None):
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"""
129129
xp = array_namespace(cond, *arrays)
130130

131+
if is_dask_namespace(xp) or is_jax_namespace(xp):
132+
# TODO: verify for jax
133+
return xp.where(cond, f(arrays[0], arrays[1]), f2(arrays[0], arrays[1]) if not fillvalue else fillvalue)
134+
131135
if (f2 is fillvalue is None) or (f2 is not None and fillvalue is not None):
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raise ValueError("Exactly one of `fillvalue` or `f2` must be given.")
133137

scipy/stats/_stats_py.py

Lines changed: 2 additions & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -1320,10 +1320,8 @@ def skew(a, axis=0, bias=True, nan_policy='propagate'):
13201320
if not bias:
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can_correct = ~zero & (n > 2)
13221322
if xp.any(can_correct):
1323-
m2 = m2[can_correct]
1324-
m3 = m3[can_correct]
13251323
nval = ((n - 1.0) * n)**0.5 / (n - 2.0) * m3 / m2**1.5
1326-
vals[can_correct] = nval
1324+
vals = xp.where(can_correct, nval, vals)
13271325

13281326
return vals[()] if vals.ndim == 0 else vals
13291327

@@ -1430,10 +1428,8 @@ def kurtosis(a, axis=0, fisher=True, bias=True, nan_policy='propagate'):
14301428
if not bias:
14311429
can_correct = ~zero & (n > 3)
14321430
if xp.any(can_correct):
1433-
m2 = m2[can_correct]
1434-
m4 = m4[can_correct]
14351431
nval = 1.0/(n-2)/(n-3) * ((n**2-1.0)*m4/m2**2.0 - 3*(n-1)**2.0)
1436-
vals[can_correct] = nval + 3.0
1432+
vals = xp.where(can_correct, nval + 3.0, vals)
14371433

14381434
vals = vals - 3 if fisher else vals
14391435
return vals[()] if vals.ndim == 0 else vals

scipy/stats/tests/test_continued_fraction.py

Lines changed: 4 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -13,6 +13,10 @@
1313
@pytest.mark.usefixtures("skip_xp_backends")
1414
@pytest.mark.skip_xp_backends('array_api_strict', reason='No fancy indexing assignment')
1515
@pytest.mark.skip_xp_backends('jax.numpy', reason="Don't support mutation")
16+
# dask doesn't like lines like this
17+
# n = int(xp.real(xp_ravel(n))[0])
18+
# (at some point in here the shape becomes nan)
19+
@pytest.mark.skip_xp_backends('dask.array', reason="dask has issues with the shapes")
1620
class TestContinuedFraction:
1721
rng = np.random.default_rng(5895448232066142650)
1822
p = rng.uniform(1, 10, size=10)

scipy/stats/tests/test_morestats.py

Lines changed: 3 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -764,6 +764,7 @@ def test_result_attributes(self, xp):
764764
"jax.numpy", cpu_only=True,
765765
reason='`var` incorrect when `correction > n` (google/jax#21330)')
766766
@pytest.mark.usefixtures("skip_xp_backends")
767+
@pytest.mark.filterwarnings("ignore:invalid value encountered in divide")
767768
def test_empty_arg(self, xp):
768769
args = (g1, g2, g3, g4, g5, g6, g7, g8, g9, g10, [])
769770
args = [xp.asarray(arg) for arg in args]
@@ -1817,6 +1818,7 @@ def test_moments_normal_distribution(self, xp):
18171818
m3 = stats.moment(data, order=3)
18181819
xp_assert_close(xp.asarray((m1, m2, m3)), expected[:-1], atol=0.02, rtol=1e-2)
18191820

1821+
@pytest.mark.filterwarnings("ignore:invalid value encountered in scalar divide")
18201822
def test_empty_input(self, xp):
18211823
if is_numpy(xp):
18221824
with pytest.warns(SmallSampleWarning, match=too_small_1d_not_omit):
@@ -1860,6 +1862,7 @@ def test_against_R(self, case, xp):
18601862

18611863
@array_api_compatible
18621864
class TestKstatVar:
1865+
@pytest.mark.filterwarnings("ignore:invalid value encountered in scalar divide")
18631866
def test_empty_input(self, xp):
18641867
x = xp.asarray([])
18651868
if is_numpy(xp):

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