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lines changed Original file line number Diff line number Diff line change @@ -2822,6 +2822,7 @@ def load_msa_from_msa_dir(
28222822 # (since we don't have a precise mapping from AFDB UniProt accession IDs to PDB chain IDs), whereas for the original
28232823 # PDB examples, we can directly identify the corresponding MSAs.
28242824 msa_fpaths = []
2825+ msa_fpath_pattern = ""
28252826 if exists (msa_dir ):
28262827 msa_fpath_pattern = (
28272828 os .path .join (msa_dir , f"{ pdb_id .split ('-assembly1' )[0 ]} _*" , "a3m" , "*.a3m" )
@@ -2880,7 +2881,7 @@ def load_msa_from_msa_dir(
28802881 if chain_id not in msas :
28812882 if verbose :
28822883 logger .warning (
2883- f"Failed to load any MSAs for chain { chain_id } of file { file_id } due to: { e } . A dummy MSA will be installed for this chain."
2884+ f"Failed to load any MSAs for chain { chain_id } of file { file_id } . A dummy MSA will be installed for this chain."
28842885 )
28852886 msas [chain_id ] = dummy_msa
28862887
@@ -2948,6 +2949,7 @@ def load_templates_from_templates_dir(
29482949 # (since we don't have a precise mapping from AFDB UniProt accession IDs to PDB chain IDs),
29492950 # whereas for the original PDB examples, we can directly identify the corresponding templates.
29502951 template_fpaths = []
2952+ template_fpath_pattern = ""
29512953 if exists (templates_dir ):
29522954 template_fpath_pattern = (
29532955 os .path .join (
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