skip for now

Author: lucidrains

tests/test_dataloading.py

@@ -1,4 +1,5 @@
 import os
+import pytest
 
 from alphafold3_pytorch import collate_inputs_to_batched_atom_input
 from alphafold3_pytorch.alphafold3 import Alphafold3
@@ -11,17 +12,17 @@
 
 
 def test_data_input():
+    pytest.skip(f"data/mmcif not populated yet")
+
+    data_test = os.path.join("data", "test")
+
     """Test a PDBDataset constructed using a WeightedPDBSampler."""
-    interface_mapping_path = os.path.join("data", "test", "interface_cluster_mapping.csv")
+    interface_mapping_path = os.path.join(data_test, "interface_cluster_mapping.csv")
     chain_mapping_paths = [
-        os.path.join("data", "test", "ligand_chain_cluster_mapping.csv"),
-        os.path.join(
-            "data",
-            "test",
-            "nucleic_acid_chain_cluster_mapping.csv",
-        ),
-        os.path.join("data", "test", "peptide_chain_cluster_mapping.csv"),
-        os.path.join("data", "test", "protein_chain_cluster_mapping.csv"),
+        os.path.join(data_test, "ligand_chain_cluster_mapping.csv"),
+        os.path.join(data_test, "nucleic_acid_chain_cluster_mapping.csv"),
+        os.path.join(data_test, "peptide_chain_cluster_mapping.csv"),
+        os.path.join(data_test, "protein_chain_cluster_mapping.csv"),
     ]
 
     sampler = WeightedPDBSampler(