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AlphaFold3Input to mmCIF File Format via BioMolecule (#230)
* Work in Progress Commit for 0-1 Protoype of AF3Input to MMCIF via Biomolecule Reverse Engineering * Cloned to_mmcif() -> to_inference_mmcif() * Tests added and passing locally * Cleaned working directory * Ruff Passing
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alphafold3_pytorch/__init__.py

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maybe_transform_to_atom_input,
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maybe_transform_to_atom_inputs,
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alphafold3_inputs_to_batched_atom_input,
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alphafold3_input_to_biomolecule,
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collate_inputs_to_batched_atom_input,
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pdb_inputs_to_batched_atom_input,
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)

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