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$ git clone https://github.com/manuel-calzolari/sklearn-genetic.git
$ cd sklearn-genetic
$ python3.13 -m venv _e
$ . _e/bin/activate
(_e) $ pip install -e .
(_e) $ pip install pytest
(_e) $ pytest -v
============================================================================================= test session starts =============================================================================================
platform linux -- Python 3.13.1, pytest-8.3.4, pluggy-1.5.0 -- /home/ben/src/forks/sklearn-genetic/_e/bin/python3
cachedir: .pytest_cache
rootdir: /home/ben/src/forks/sklearn-genetic
collected 1 item
genetic_selection/tests/test_selection.py::test_genetic_selection FAILED [100%]
================================================================================================== FAILURES ===================================================================================================
___________________________________________________________________________________________ test_genetic_selection ____________________________________________________________________________________________
multiprocess.pool.RemoteTraceback:
"""
Traceback (most recent call last):
File "/home/ben/src/forks/sklearn-genetic/_e/lib64/python3.13/site-packages/multiprocess/pool.py", line 125, in worker
result = (True, func(*args, **kwds))
~~~~^^^^^^^^^^^^^^^
File "/home/ben/src/forks/sklearn-genetic/_e/lib64/python3.13/site-packages/multiprocess/pool.py", line 48, in mapstar
return list(map(*args))
File "/home/ben/src/forks/sklearn-genetic/genetic_selection/gscv.py", line 126, in _evalFunction
scores = cross_val_score(
estimator=estimator, X=X_selected, y=y, groups=groups, scoring=scorer, cv=cv, fit_params=fit_params
)
File "/home/ben/src/forks/sklearn-genetic/_e/lib64/python3.13/site-packages/sklearn/utils/_param_validation.py", line 194, in wrapper
params = func_sig.bind(*args, **kwargs)
File "/usr/lib64/python3.13/inspect.py", line 3264, in bind
return self._bind(args, kwargs)
~~~~~~~~~~^^^^^^^^^^^^^^
File "/usr/lib64/python3.13/inspect.py", line 3253, in _bind
raise TypeError(
'got an unexpected keyword argument {arg!r}'.format(
arg=next(iter(kwargs))))
TypeError: got an unexpected keyword argument 'fit_params'
"""
The above exception was the direct cause of the following exception:
data = (array([[5.10000000e+00, 3.50000000e+00, 1.40000000e+00, ...,
5.37916241e-02, 3.73188791e-02, 9.08730246e-02],...2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2,
2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2]))
def test_genetic_selection(data):
random.seed(42)
np.random.seed(42)
X = data[0]
y = data[1]
estimator = linear_model.LogisticRegression(solver="liblinear", multi_class="ovr")
selector = GeneticSelectionCV(
estimator,
cv=5,
verbose=1,
scoring="accuracy",
max_features=5,
n_population=50,
crossover_proba=0.5,
mutation_proba=0.2,
n_generations=40,
crossover_independent_proba=0.5,
mutation_independent_proba=0.05,
tournament_size=3,
n_gen_no_change=10,
caching=True,
n_jobs=-1,
)
> selector = selector.fit(X, y)
genetic_selection/tests/test_selection.py:41:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
genetic_selection/gscv.py:310: in fit
return self._fit(X, y, groups)
genetic_selection/gscv.py:411: in _fit
_, log = _eaFunction(
genetic_selection/gscv.py:47: in _eaFunction
fitnesses = toolbox.map(toolbox.evaluate, invalid_ind)
_e/lib64/python3.13/site-packages/multiprocess/pool.py:367: in map
return self._map_async(func, iterable, mapstar, chunksize).get()
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <multiprocess.pool.MapResult object at 0x7f2fa588c830>, timeout = None
def get(self, timeout=None):
self.wait(timeout)
if not self.ready():
raise TimeoutError
if self._success:
return self._value
else:
> raise self._value
E TypeError: got an unexpected keyword argument 'fit_params'
_e/lib64/python3.13/site-packages/multiprocess/pool.py:774: TypeError
-------------------------------------------------------------------------------------------- Captured stdout call ---------------------------------------------------------------------------------------------
Selecting features with genetic algorithm.
=========================================================================================== short test summary info ===========================================================================================
FAILED genetic_selection/tests/test_selection.py::test_genetic_selection - TypeError: got an unexpected keyword argument 'fit_params'
============================================================================================== 1 failed in 0.58s ==============================================================================================
This appears to be related to scikit-learn/scikit-learn#29999.
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