0.11.0 Release

High level summary

New elements:

• mapping_set_title to capture a human-readable title for a mapping set
• registry_title and registry_description to capture the human-readable title and description of an SSSOM mapping set registry
• curation_rule to capture a (potentially) complex (set of) condition(s) executed by an agent (usually human) that led to the establishment of a mapping.

Updated elements:

• Added mapping_source slot to Mapping
• Improve documentation for subject_category and object_category elements

Documentation

• Compiled a list of all SSSOM talks: https://mapping-commons.github.io/sssom/presentations/
• Document chaining rules: https://mapping-commons.github.io/sssom/chaining_rules/

Quality control and Technical infrastructure

• Make adding a concrete SSSOM example part of the new element request
• Adding QC checks for example SSSOM files hosted in the repo

Detailed summary

• Adding mapping_source slot to Mapping by @matentzn in #230
• Add mapping_set_title by @matentzn in #220
• Add registry title and registry description slots by @anitacaron in #240
• Update SSSOM talks 2022 in docs by @matentzn in #252
• Document chaining rules by @matentzn in #242
• Improve documentation for subject and object categories by @matentzn in #257
• Add inversion rules for SEMAPV cross-species predicates. by @gouttegd in #261
• Make adding a concrete SSSOM example part of the new element request by @matentzn in #266
• Add some examples of using see_also to SSSOM schema by @matentzn in #267
• Making adding a link to a working example required when adding a new field by @matentzn in #269
• Adding QC checks for example SSSOM files by @matentzn in #268
• Add curation_rule to SSSOM by @matentzn in #258
• SSSOM 0.11.1 release by @matentzn in #270

New Contributors

• @anitacaron made their first contribution in #240
• @gouttegd made their first contribution in #261

Acknowledgements

• The SSSOM core team thanks @saubin78 and @croussey for thei significant contributions to discussions and creation of examples!

Full Changelog: 0.10.0...0.11.0

0.10.1

What's Changed

• fixed some typos by @nlharris in #208
• revise typo by @nicolevasilevsky in #209
• fix mermaid docs generated via linkml doc-gen by @sierra-moxon in #213
• mermaid2 plugin, linkml & linkml-runtime version update by @sierra-moxon in #214
• Fix broken linke in docs by @matentzn in #216

New Contributors

• @nlharris made their first contribution in #208
• @nicolevasilevsky made their first contribution in #209

Full Changelog: 0.9.4...0.10.0

v0.9.4

What's Changed

• add auto generated citation by @sierra-moxon in #203
• Copyediting on mapping-predicates text by @caufieldjh in #204
• Fixing hasDbXref reference in examples by @matentzn in #201
• Update the examples and docs to reflect new spec on mapping_justification by @matentzn in #205

New Contributors

• @sierra-moxon made their first contribution in #203
• @caufieldjh made their first contribution in #204

Full Changelog: 0.9.0...0.9.4

v0.9.3

What's Changed

• Corrected path for doc generation by @hrshdhgd in #200

Full Changelog: 0.9.2...0.9.3

v0.9.2

What's Changed

• Fix wrong namespace in EntityReference by @matentzn in #198
• Edit for packaging by @hrshdhgd in #199

Full Changelog: 0.9.1...0.9.2

v0.9.1

What's Changed

• Issue 155 and 116 by @hrshdhgd in #118
• issue 115+116 - II by @hrshdhgd in #120
• Revert "issue 115+116 - II" by @hrshdhgd in #121
• Add arXiv citation to README by @cthoyt in #128
• Add some background on mappings to documentation by @matentzn in #130
• metadatdata typo by @ahwagner in #133
• Adding mapping_source to SSSOM by @matentzn in #135
• Include OWL files. Possibly fixes #102 by @cmungall in #140
• Replacing match_term_type by subject and object_type by @matentzn in #153
• Breaking change: Replacing match_type with mapping_justification by @matentzn in #154
• Migrate to new LinkML repo template by @matentzn in #162
• Changing model location by @matentzn in #163
• Create tutorials.md by @matentzn in #97
• Documentation Deploy by @hrshdhgd in #173
• Docs contribution by @hrshdhgd in #174
• Change w3id.org to https by @matentzn in #171
• Removes some legacy elements that are not part of the model by @matentzn in #158
• Make project ready for PyPI release by @hrshdhgd in #182
• minor change by @hrshdhgd in #183
• updated linkml-runtime by @hrshdhgd in #184
• Adding mapping_set_source by @matentzn in #179
• Change subject and object source references to be CURIEs in table format by @matentzn in #177
• Changing preprocessing fields to controlled vocabulary by @matentzn in #178
• Restrict justifications to specific set by @matentzn in #164
• Adding slots for mapping commons work by @matentzn in #159
• Create contribution instructions by @matentzn in #175
• Fixes Edit links in documentations dont work #190 by @hrshdhgd in #191
• deploy using gh action by @hrshdhgd in #192
• Edit for packaging by @hrshdhgd in #194
• Update sssom_schema.yaml by @matentzn in #195
• Edit for packaging by @hrshdhgd in #196

New Contributors

• @ahwagner made their first contribution in #133

Full Changelog: 0.9.0...0.9.1

December 2021 Release

This is the first official "beta" release. We previously created, erroneously, a 1.0 release, but decided to withdraw it, because of an unresolved discussion on how to handle semantic ENUMS (#112).

We are using the 0.9 release version to indicate that there may be some breaking changes introduced before releasing 1.0, but the metadata schema is now stable enough to start building experimental pipelines.