fix mybinder

Author: marius311

.github/workflows/docbuild.yml

@@ -17,7 +17,7 @@ jobs:
           username: ${{ secrets.DOCKER_USERNAME }}
           password: ${{ secrets.DOCKER_PASSWORD }}
           repository: marius311/cmblensing.jl
-          build_args: PACKAGECOMPILE=0
+          build_args: PACKAGECOMPILE=1, PRECOMPILE=0, RUNDOCS=1
           tag_with_ref: true
       # - name: docker-build-placeholder
       #   run: docker pull marius311/cmblensing.jl:latest

Dockerfile

@@ -28,7 +28,7 @@ RUN apt-get update \
 
 ## install julia
 RUN mkdir /opt/julia \
-    && curl -L https://julialang-s3.julialang.org/bin/linux/x64/1.4/julia-1.4.0-linux-x86_64.tar.gz | tar zxf - -C /opt/julia --strip=1 \
+    && curl -L https://julialang-s3.julialang.org/bin/linux/x64/1.4/julia-1.4.1-linux-x86_64.tar.gz | tar zxf - -C /opt/julia --strip=1 \
     && chown -R 1000 /opt/julia \
     && ln -s /opt/julia/bin/julia /usr/local/bin
 
@@ -85,22 +85,32 @@ ARG JULIA_FFTW_PROVIDER=MKL
 # Project.toml (and making a dummy src/CMBLensing.jl which we have to), so that
 # other changes to files in src/ won't have to redo these steps
 COPY --chown=1000 Project.toml $HOME/CMBLensing/
-COPY --chown=1000 docs/Project.toml $HOME/CMBLensing/docs/
+COPY --chown=1000 docs/Project.toml docs/Manifest.toml $HOME/CMBLensing/docs/
 RUN mkdir $HOME/CMBLensing/src && touch $HOME/CMBLensing/src/CMBLensing.jl
 ENV JULIA_PROJECT=$HOME/CMBLensing/docs
-RUN julia -e 'using Pkg; pkg"dev ~/CMBLensing; instantiate; add ProgressMeter#master; precompile"' \
+ENV CMBLENSING_NONLAZY_PYPLOT=1
+RUN julia -e 'using Pkg; pkg"instantiate"' \
+    && if [ "$PRECOMPILE" = "1" ]; then julia -e 'using Pkg; pkg"precompile"'; fi \
     && rm -rf $HOME/.julia/conda/3/pkgs
 COPY --chown=1000 src $HOME/CMBLensing/src
-RUN (test $PRECOMPILE = 0 || julia -e 'using Pkg; pkg"precompile"')
+RUN if [ "$PRECOMPILE" = "1" ]; then julia -e 'using Pkg; pkg"precompile"'; fi
 
 
 
 ## PackageCompiler
 # bake CMBLensing into the system image to further speed up load times and
 # reduce memory usage during package load (the latter is necessary otherwise we
 # hit the mybinder memory limit)
-RUN test $PACKAGECOMPILE = 0 \
-    || julia -e 'using PackageCompiler; create_sysimage([:CMBLensing],cpu_target="generic",replace_default=true)'
+COPY docs/pyplot_packagecompiler_script.jl /tmp/
+RUN if [ "$PACKAGECOMPILE" = "1" ]; then \
+        julia -e 'using PackageCompiler; \
+                  create_sysimage(\
+                      [:PyCall, :IJulia, :PyPlot, :CMBLensing], \
+                      cpu_target="generic", \
+                      replace_default=true, \
+                      script="/tmp/pyplot_packagecompiler_script.jl" \
+                  )'; \
+    fi
 
 ## execute documentation notebooks and save outputs
 COPY --chown=1000 docs/src $HOME/CMBLensing/docs/src

Project.toml

@@ -33,6 +33,7 @@ Pkg = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
 Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
 ProgressMeter = "92933f4c-e287-5a05-a399-4b506db050ca"
 PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0"
+PyPlot = "d330b81b-6aea-500a-939a-2ce795aea3ee"
 QuadGK = "1fd47b50-473d-5c70-9696-f719f8f3bcdc"
 Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
 Requires = "ae029012-a4dd-5104-9daa-d747884805df"