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Use ms2deepscore 2.6.0 #41

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Use ms2deepscore 2.6.0

Use ms2deepscore 2.6.0 #41

Triggered via push December 8, 2025 15:08
@niekdejongeniekdejonge
pushed 8024263
add_benchmarking_method
Status Failure
Total duration 6m 41s
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CI_first_code_checks.yml

on: push
first code check / python-3.13 / ubuntu-latest
6m 36s
first code check / python-3.13 / ubuntu-latest
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10 errors
Ruff (E501): ms2query/benchmarking/reference_methods/predict_with_integrated_similarity_flow.py#L86
ms2query/benchmarking/reference_methods/predict_with_integrated_similarity_flow.py:86:121: E501 Line too long (152 > 120)
Ruff (I001): ms2query/benchmarking/reference_methods/predict_with_integrated_similarity_flow.py#L1
ms2query/benchmarking/reference_methods/predict_with_integrated_similarity_flow.py:1:1: I001 Import block is un-sorted or un-formatted
Ruff (I001): ms2query/benchmarking/reference_methods/predict_highest_ms2deepscore.py#L1
ms2query/benchmarking/reference_methods/predict_highest_ms2deepscore.py:1:1: I001 Import block is un-sorted or un-formatted
Ruff (I001): ms2query/benchmarking/reference_methods/predict_highest_cosine.py#L1
ms2query/benchmarking/reference_methods/predict_highest_cosine.py:1:1: I001 Import block is un-sorted or un-formatted
Ruff (I001): ms2query/benchmarking/reference_methods/predict_best_possible_match.py#L1
ms2query/benchmarking/reference_methods/predict_best_possible_match.py:1:1: I001 Import block is un-sorted or un-formatted
Ruff (E501): ms2query/benchmarking/reference_methods/PredictMS2DeepScoreSimilarity.py#L26
ms2query/benchmarking/reference_methods/PredictMS2DeepScoreSimilarity.py:26:121: E501 Line too long (143 > 120)
Ruff (I001): ms2query/benchmarking/reference_methods/PredictMS2DeepScoreSimilarity.py#L1
ms2query/benchmarking/reference_methods/PredictMS2DeepScoreSimilarity.py:1:1: I001 Import block is un-sorted or un-formatted
Ruff (I001): ms2query/benchmarking/SpectrumDataSet.py#L1
ms2query/benchmarking/SpectrumDataSet.py:1:1: I001 Import block is un-sorted or un-formatted
Ruff (E501): ms2query/benchmarking/EvaluateMethods.py#L67
ms2query/benchmarking/EvaluateMethods.py:67:121: E501 Line too long (130 > 120)
Ruff (I001): ms2query/benchmarking/EvaluateMethods.py#L1
ms2query/benchmarking/EvaluateMethods.py:1:1: I001 Import block is un-sorted or un-formatted