update dependencies for ubuntu-latest/py3.12

Author: github-actions

requirements/ubuntu-latest_py3.12.txt

@@ -18,7 +18,7 @@ argon2-cffi==25.1.0
     # via
     #   jupyter-server
     #   notebook
-argon2-cffi-bindings==21.2.0
+argon2-cffi-bindings==25.1.0
     # via argon2-cffi
 arrow==1.3.0
     # via isoduration
@@ -41,15 +41,15 @@ bleach[css]==6.2.0
     # via nbconvert
 blinker==1.9.0
     # via flask
-boto3==1.39.14
+boto3==1.40.1
     # via maggma
-botocore==1.39.14
+botocore==1.40.1
     # via
     #   boto3
     #   s3transfer
 cachelib==0.13.0
     # via flask-caching
-certifi==2025.7.14
+certifi==2025.8.3
     # via requests
 cffi==1.17.1
     # via
@@ -70,7 +70,7 @@ crystaltoolkit-extension==0.6.0
     # via crystal_toolkit (pyproject.toml)
 cycler==0.12.1
     # via matplotlib
-dash==3.1.1
+dash==3.2.0
     # via crystal_toolkit (pyproject.toml)
 dash-mp-components==0.4.47
     # via crystal_toolkit (pyproject.toml)
@@ -113,6 +113,8 @@ imageio==2.37.0
     # via scikit-image
 importlib-metadata==8.7.0
     # via dash
+invoke==2.2.0
+    # via paramiko
 ipykernel==6.29.5
     # via
     #   nbclassic
@@ -221,7 +223,7 @@ markupsafe==3.0.2
     #   jinja2
     #   nbconvert
     #   werkzeug
-matplotlib==3.10.3
+matplotlib==3.10.5
     # via pymatgen
 matplotlib-inline==0.1.7
     # via
@@ -237,15 +239,15 @@ monty==2025.3.3
     #   maggma
     #   mp-api
     #   pymatgen
-mp-api==0.45.7
+mp-api==0.45.8
     # via crystal_toolkit (pyproject.toml)
 mpmath==1.3.0
     # via sympy
 msgpack==1.1.1
     # via
     #   maggma
     #   mp-api
-narwhals==2.0.0
+narwhals==2.0.1
     # via plotly
 nbclassic==1.3.1
     # via
@@ -320,7 +322,7 @@ pandas==2.3.1
     #   pymatgen
 pandocfilters==1.5.1
     # via nbconvert
-paramiko==3.5.1
+paramiko==4.0.0
     # via sshtunnel
 parso==0.8.4
     # via jedi
@@ -407,7 +409,7 @@ pyyaml==6.0.2
     # via
     #   jupyter-events
     #   pybtex
-pyzmq==27.0.0
+pyzmq==27.0.1
     # via
     #   ipykernel
     #   jupyter-client
@@ -425,7 +427,7 @@ requests==2.32.4
     #   jupyterlab-server
     #   mp-api
     #   pymatgen
-retrying==1.4.1
+retrying==1.4.2
     # via dash
 rfc3339-validator==0.1.4
     # via

requirements/ubuntu-latest_py3.12_extras.txt

@@ -8,7 +8,7 @@ aiofiles==22.1.0
     # via ypy-websocket
 aiohappyeyeballs==2.6.1
     # via aiohttp
-aiohttp==3.12.14
+aiohttp==3.12.15
     # via dephell
 aioitertools==0.12.0
     # via maggma
@@ -28,7 +28,7 @@ argon2-cffi==25.1.0
     # via
     #   jupyter-server
     #   notebook
-argon2-cffi-bindings==21.2.0
+argon2-cffi-bindings==25.1.0
     # via argon2-cffi
 arrow==1.3.0
     # via isoduration
@@ -75,17 +75,17 @@ blinker==1.9.0
     # via flask
 boltztrap2==25.3.1
     # via ifermi
-boto3==1.39.14
+boto3==1.40.1
     # via maggma
-botocore==1.39.14
+botocore==1.40.1
     # via
     #   boto3
     #   s3transfer
 cachelib==0.13.0
     # via flask-caching
 cerberus==1.3.7
     # via dephell
-certifi==2025.7.14
+certifi==2025.8.3
     # via
     #   dephell
     #   httpcore
@@ -124,7 +124,7 @@ commonmark==0.9.1
     # via recommonmark
 contourpy==1.3.3
     # via matplotlib
-coverage[toml]==7.10.1
+coverage[toml]==7.10.2
     # via pytest-cov
 cryptography==45.0.5
     # via
@@ -136,7 +136,7 @@ cycler==0.12.1
     # via matplotlib
 cython==3.1.2
     # via boltztrap2
-dash[testing]==3.1.1
+dash[testing]==3.2.0
     # via
     #   crystal_toolkit (pyproject.toml)
     #   dash-extensions
@@ -274,7 +274,7 @@ habanero==2.3.0
     # via crystal_toolkit (pyproject.toml)
 hdf5plugin==5.1.0
     # via py4dstem
-hiphive==1.4
+hiphive==1.5
     # via crystal_toolkit (pyproject.toml)
 httpcore==1.0.9
     # via httpx
@@ -301,6 +301,8 @@ inflect==7.5.0
     # via robocrys
 iniconfig==2.1.0
     # via pytest
+invoke==2.2.0
+    # via paramiko
 ipykernel==6.29.5
     # via
     #   nbclassic
@@ -435,7 +437,7 @@ markupsafe==3.0.2
     #   werkzeug
 matminer==0.9.3
     # via robocrys
-matplotlib==3.10.3
+matplotlib==3.10.5
     # via
     #   ase
     #   boltztrap2
@@ -470,7 +472,7 @@ more-itertools==10.7.0
     # via
     #   dash-extensions
     #   inflect
-mp-api==0.45.7
+mp-api==0.45.8
     # via crystal_toolkit (pyproject.toml)
 mpire==2.10.2
     # via py4dstem
@@ -489,7 +491,7 @@ multiprocess==0.70.18
     # via dash
 mypy-extensions==1.1.0
     # via black
-narwhals==2.0.0
+narwhals==2.0.1
     # via plotly
 nbclassic==1.3.1
     # via
@@ -620,7 +622,7 @@ pandas==2.3.1
     #   pymatgen
 pandocfilters==1.5.1
     # via nbconvert
-paramiko==3.5.1
+paramiko==4.0.0
     # via sshtunnel
 parso==0.8.4
     # via jedi
@@ -634,7 +636,7 @@ pexpect==4.9.0
     # via
     #   dephell-shells
     #   ipython
-phonopy==2.42.0
+phonopy==2.43.0
     # via crystal_toolkit (pyproject.toml)
 pillow==11.3.0
     # via
@@ -789,7 +791,7 @@ pyyaml==6.0.2
     #   pre-commit
     #   pyaml
     #   pybtex
-pyzmq==27.0.0
+pyzmq==27.0.1
     # via
     #   ipykernel
     #   jupyter-client
@@ -820,7 +822,7 @@ requests[security,socks]==2.32.4
     #   pymatgen
     #   pytest-base-url
     #   sphinx
-retrying==1.4.1
+retrying==1.4.2
     # via dash
 rfc3339-validator==0.1.4
     # via
@@ -860,7 +862,6 @@ scikit-learn==1.4.2
     # via
     #   crystal_toolkit (pyproject.toml)
     #   dscribe
-    #   hiphive
     #   matminer
     #   py4dstem
     #   scikit-optimize
@@ -1006,7 +1007,7 @@ tqdm==4.67.1
     #   mpire
     #   py4dstem
     #   pymatgen
-trainstation==1.1
+trainstation==1.2
     # via hiphive
 traitlets==5.14.3
     # via
@@ -1063,7 +1064,7 @@ urllib3==2.5.0
     #   habanero
     #   requests
     #   selenium
-virtualenv==20.32.0
+virtualenv==20.33.0
     # via pre-commit
 vtk==9.5.0
     # via dash-vtk