Merge branch 'main' into auto-dependency-upgrades

Author: rkingsbury

docs/CHANGELOG.md

@@ -1,13 +1,21 @@
 # Changelog
 
-## [Unreleased](https://github.com/materialsproject/maggma/tree/HEAD)
+## [v0.71.3](https://github.com/materialsproject/maggma/tree/v0.71.3) (2025-02-06)
 
-[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.71.2...HEAD)
+[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.71.2...v0.71.3)
+
+**Implemented enhancements:**
+
+- zopen: add explicit encoding to read\_json; explicit mode [\#1030](https://github.com/materialsproject/maggma/pull/1030) ([rkingsbury](https://github.com/rkingsbury))
 
 **Fixed bugs:**
 
 - \[Bug\]: monty's zopen expects keyword `mode` to be set [\#1024](https://github.com/materialsproject/maggma/issues/1024)
 
+**Merged pull requests:**
+
+- Remove python 3.8 classifier from pyproject.toml [\#1029](https://github.com/materialsproject/maggma/pull/1029) ([Andrew-S-Rosen](https://github.com/Andrew-S-Rosen))
+
 ## [v0.71.2](https://github.com/materialsproject/maggma/tree/v0.71.2) (2025-01-21)
 
 [Full Changelog](https://github.com/materialsproject/maggma/compare/v0.71.1...v0.71.2)
@@ -472,19 +480,19 @@
 
 ## [v0.53.0](https://github.com/materialsproject/maggma/tree/v0.53.0) (2023-08-02)
 
-[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.52.1...v0.53.0)
+[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.52.2...v0.53.0)
 
 **Merged pull requests:**
 
 - allow \>5GB and turn on multi-part uploads for AWS [\#829](https://github.com/materialsproject/maggma/pull/829) ([kbuma](https://github.com/kbuma))
 
-## [v0.52.1](https://github.com/materialsproject/maggma/tree/v0.52.1) (2023-08-02)
+## [v0.52.2](https://github.com/materialsproject/maggma/tree/v0.52.2) (2023-08-02)
 
-[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.52.2...v0.52.1)
+[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.52.1...v0.52.2)
 
-## [v0.52.2](https://github.com/materialsproject/maggma/tree/v0.52.2) (2023-08-02)
+## [v0.52.1](https://github.com/materialsproject/maggma/tree/v0.52.1) (2023-08-02)
 
-[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.52.0...v0.52.2)
+[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.52.0...v0.52.1)
 
 **Merged pull requests:**
 
@@ -672,19 +680,19 @@
 
 ## [v0.51.4](https://github.com/materialsproject/maggma/tree/v0.51.4) (2023-06-02)
 
-[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.51.2...v0.51.4)
+[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.51.3...v0.51.4)
 
 **Merged pull requests:**
 
 - modify JSONStore file creation [\#792](https://github.com/materialsproject/maggma/pull/792) ([gpetretto](https://github.com/gpetretto))
 
-## [v0.51.2](https://github.com/materialsproject/maggma/tree/v0.51.2) (2023-05-29)
+## [v0.51.3](https://github.com/materialsproject/maggma/tree/v0.51.3) (2023-05-29)
 
-[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.51.3...v0.51.2)
+[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.51.2...v0.51.3)
 
-## [v0.51.3](https://github.com/materialsproject/maggma/tree/v0.51.3) (2023-05-29)
+## [v0.51.2](https://github.com/materialsproject/maggma/tree/v0.51.2) (2023-05-29)
 
-[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.51.1...v0.51.3)
+[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.51.1...v0.51.2)
 
 **Merged pull requests:**
 
@@ -821,19 +829,19 @@
 
 ## [v0.49.9](https://github.com/materialsproject/maggma/tree/v0.49.9) (2022-11-01)
 
-[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.49.7...v0.49.9)
+[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.49.8...v0.49.9)
 
 **Merged pull requests:**
 
 - Parse datetime with dateutil [\#741](https://github.com/materialsproject/maggma/pull/741) ([munrojm](https://github.com/munrojm))
 
-## [v0.49.7](https://github.com/materialsproject/maggma/tree/v0.49.7) (2022-10-25)
+## [v0.49.8](https://github.com/materialsproject/maggma/tree/v0.49.8) (2022-10-25)
 
-[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.49.8...v0.49.7)
+[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.49.7...v0.49.8)
 
-## [v0.49.8](https://github.com/materialsproject/maggma/tree/v0.49.8) (2022-10-25)
+## [v0.49.7](https://github.com/materialsproject/maggma/tree/v0.49.7) (2022-10-25)
 
-[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.49.6...v0.49.8)
+[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.49.6...v0.49.7)
 
 **Merged pull requests:**
 
@@ -1042,23 +1050,23 @@
 
 ## [v0.44.1](https://github.com/materialsproject/maggma/tree/v0.44.1) (2022-03-08)
 
-[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.42.0...v0.44.1)
+[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.43.0...v0.44.1)
 
 **Merged pull requests:**
 
 - added localhost test for MongoURIStore [\#595](https://github.com/materialsproject/maggma/pull/595) ([jmmshn](https://github.com/jmmshn))
 
-## [v0.42.0](https://github.com/materialsproject/maggma/tree/v0.42.0) (2022-03-07)
-
-[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.43.0...v0.42.0)
-
 ## [v0.43.0](https://github.com/materialsproject/maggma/tree/v0.43.0) (2022-03-07)
 
 [Full Changelog](https://github.com/materialsproject/maggma/compare/v0.44.0...v0.43.0)
 
 ## [v0.44.0](https://github.com/materialsproject/maggma/tree/v0.44.0) (2022-03-07)
 
-[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.41.1...v0.44.0)
+[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.42.0...v0.44.0)
+
+## [v0.42.0](https://github.com/materialsproject/maggma/tree/v0.42.0) (2022-03-07)
+
+[Full Changelog](https://github.com/materialsproject/maggma/compare/v0.41.1...v0.42.0)
 
 **Merged pull requests:**
 

pyproject.toml

@@ -27,7 +27,7 @@ dependencies = [
         "ruamel.yaml>=0.17",
         "pydantic>=2.0",
         "pydantic-settings>=2.0.3",
-        "pymongo>=4.2.0",
+        "pymongo>=4.2.0,<4.11",
         "monty>=2024.5.24",
         "mongomock>=3.10.0",
         "pydash>=4.1.0",

src/maggma/stores/file_store.py

@@ -442,7 +442,7 @@ def query(  # type: ignore
                     # TODO - could add more logic for detecting different file types
                     # and more nuanced exception handling
                     try:
-                        with zopen(d["path"], "rt", encoding=self.encoding) as f:
+                        with zopen(d["path"], mode="rt", encoding=self.encoding) as f:
                             data = f.read()
                     except Exception as e:
                         data = f"Unable to read: {e}"

src/maggma/stores/mongolike.py

@@ -684,7 +684,7 @@ def connect(self, force_reset: bool = False):
 
             # create the .json file if it does not exist
             if not self.read_only and not Path(self.paths[0]).exists():
-                with zopen(self.paths[0], "wt", encoding=self.encoding) as f:
+                with zopen(self.paths[0], mode="wt", encoding=self.encoding) as f:
                     data: list[dict] = []
                     bytesdata = orjson.dumps(data)
                     f.write(bytesdata.decode("utf-8"))
@@ -711,7 +711,7 @@ def read_json_file(self, path) -> list:
         Args:
             path: Path to the JSON file to be read
         """
-        with zopen(path, "rt") as f:
+        with zopen(path, mode="rt", encoding=self.encoding) as f:
             data = f.read()
             data = data.decode() if isinstance(data, bytes) else data
             objects = bson.json_util.loads(data) if "$oid" in data else orjson.loads(data)
@@ -761,7 +761,7 @@ def update_json_file(self):
         """
         Updates the json file when a write-like operation is performed.
         """
-        with zopen(self.paths[0], "wt", encoding=self.encoding) as f:
+        with zopen(self.paths[0], mode="wt", encoding=self.encoding) as f:
             data = list(self.query())
             for d in data:
                 d.pop("_id")