From 99307ed820267e80c7cc6e8b3c3fe73b65811fad Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Mon, 3 Mar 2025 20:02:45 +0000
Subject: [PATCH 1/2] pre-commit autoupdate
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.9.6 → v0.9.9](https://github.com/astral-sh/ruff-pre-commit/compare/v0.9.6...v0.9.9)
- [github.com/pre-commit/pre-commit-hooks: v4.6.0 → v5.0.0](https://github.com/pre-commit/pre-commit-hooks/compare/v4.6.0...v5.0.0)
- [github.com/pre-commit/mirrors-mypy: v1.10.1 → v1.15.0](https://github.com/pre-commit/mirrors-mypy/compare/v1.10.1...v1.15.0)
- [github.com/codespell-project/codespell: v2.3.0 → v2.4.1](https://github.com/codespell-project/codespell/compare/v2.3.0...v2.4.1)
- [github.com/MarcoGorelli/cython-lint: v0.16.2 → v0.16.6](https://github.com/MarcoGorelli/cython-lint/compare/v0.16.2...v0.16.6)
- [github.com/adamchainz/blacken-docs: 1.16.0 → 1.19.1](https://github.com/adamchainz/blacken-docs/compare/1.16.0...1.19.1)
- [github.com/igorshubovych/markdownlint-cli: v0.41.0 → v0.44.0](https://github.com/igorshubovych/markdownlint-cli/compare/v0.41.0...v0.44.0)
- [github.com/kynan/nbstripout: 0.7.1 → 0.8.1](https://github.com/kynan/nbstripout/compare/0.7.1...0.8.1)
- [github.com/RobertCraigie/pyright-python: v1.1.369 → v1.1.396](https://github.com/RobertCraigie/pyright-python/compare/v1.1.369...v1.1.396)
---
 .pre-commit-config.yaml | 18 +++++++++---------
 1 file changed, 9 insertions(+), 9 deletions(-)

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index baef151..21bc2b4 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -8,26 +8,26 @@ ci:
 
 repos:
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.9.6
+    rev: v0.9.9
     hooks:
       - id: ruff
         args: [ --fix, --unsafe-fixes ]
       - id: ruff-format
 
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.6.0
+    rev: v5.0.0
     hooks:
       - id: check-yaml
       - id: end-of-file-fixer
       - id: trailing-whitespace
 
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.10.1
+    rev: v1.15.0
     hooks:
       - id: mypy
 
   - repo: https://github.com/codespell-project/codespell
-    rev: v2.3.0
+    rev: v2.4.1
     hooks:
       - id: codespell
         stages: [ pre-commit, commit-msg ]
@@ -35,19 +35,19 @@ repos:
         additional_dependencies: [ tomli ] # needed to read pyproject.toml below py3.11
 
   - repo: https://github.com/MarcoGorelli/cython-lint
-    rev: v0.16.2
+    rev: v0.16.6
     hooks:
       - id: cython-lint
         args: [ --no-pycodestyle ]
       - id: double-quote-cython-strings
 
   - repo: https://github.com/adamchainz/blacken-docs
-    rev: 1.16.0
+    rev: 1.19.1
     hooks:
       - id: blacken-docs
 
   - repo: https://github.com/igorshubovych/markdownlint-cli
-    rev: v0.41.0
+    rev: v0.44.0
     hooks:
       - id: markdownlint
         # MD013: line too long
@@ -58,12 +58,12 @@ repos:
         args: [ --disable, MD013, MD024, MD025, MD033, MD041, "--" ]
 
   - repo: https://github.com/kynan/nbstripout
-    rev: 0.7.1
+    rev: 0.8.1
     hooks:
       - id: nbstripout
         args: [ --drop-empty-cells, --keep-output ]
 
   - repo: https://github.com/RobertCraigie/pyright-python
-    rev: v1.1.369
+    rev: v1.1.396
     hooks:
       - id: pyright

From 13694a96e7f0780de00dd9a63570dd701b208ec8 Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Mon, 3 Mar 2025 20:03:53 +0000
Subject: [PATCH 2/2] pre-commit auto-fixes

---
 examples/neb_idpp_solver.ipynb | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/examples/neb_idpp_solver.ipynb b/examples/neb_idpp_solver.ipynb
index ad02483..e57344c 100644
--- a/examples/neb_idpp_solver.ipynb
+++ b/examples/neb_idpp_solver.ipynb
@@ -18,8 +18,7 @@
     "init_struct = Structure.from_file(os.path.join(dirname, \"CONTCAR-0\"), False)\n",
     "final_struct = Structure.from_file(os.path.join(dirname, \"CONTCAR-1\"), False)\n",
     "\n",
-    "obj = IDPPSolver.from_endpoints(endpoints=[init_struct, final_struct], nimages=3,\n",
-    "                                sort_tol=1.0)\n",
+    "obj = IDPPSolver.from_endpoints(endpoints=[init_struct, final_struct], nimages=3, sort_tol=1.0)\n",
     "new_path = obj.run(maxiter=5000, tol=1e-5, gtol=1e-3, species=[\"Li\"])"
    ]
   }