pydantic deprecation fix

matthiaskoenig · matthiaskoenig · commit 4db3f21695fc · 2026-01-22T20:07:43.000+01:00
diff --git a/src/sbmlutils/report/api.py b/src/sbmlutils/report/api.py
@@ -182,7 +182,7 @@ def json_for_omex(omex_path: Path) -> Dict[str, Any]:
             ),
         )
 
-    content = {"uid": uid, "manifest": omex.manifest.dict(), "reports": {}}
+    content = {"uid": uid, "manifest": omex.manifest.model_dump(), "reports": {}}
 
     # Add report JSON for all SBML files
     entry: ManifestEntry

Original file line number	Diff line number	Diff line change
`@@ -182,7 +182,7 @@ def json_for_omex(omex_path: Path) -> Dict[str, Any]:`
`182`	`182`	`),`
`183`	`183`	`)`
`184`	`184`
`185`		`- content = {"uid": uid, "manifest": omex.manifest.dict(), "reports": {}}`
	`185`	`+ content = {"uid": uid, "manifest": omex.manifest.model_dump(), "reports": {}}`
`186`	`186`
`187`	`187`	`# Add report JSON for all SBML files`
`188`	`188`	`entry: ManifestEntry`