Remove --only_score in align_benchmark

Author: criniguez

tools/README.md

@@ -187,9 +187,6 @@ For a detailed list of parameters for each algorithm, please refer to the main [
     # Percentage of HEW to consider that the estimation is not fitted in QuickEd.
     #  This parameter sets the same percentage for both steps.
 
-  --only-score
-    # Only compute the alignment score.
-
   --force-scalar
     # Force the use of the scalar implementations of the algorithms.
 ```

tools/align_benchmark/align_benchmark.c

@@ -153,10 +153,10 @@ void align_benchmark_run_algorithm(
       break;
     case alignment_edit_windowed:
       benchmark_windowed(align_input,parameters.window_size, parameters.overlap_size,
-                          parameters.force_scalar, parameters.only_score);
+                          parameters.force_scalar, false);
       break;
     case alignment_edit_banded:
-      benchmark_banded(align_input,parameters.bandwidth, parameters.only_score);
+      benchmark_banded(align_input,parameters.bandwidth, false);
       break;
     case alignment_edit_banded_hirschberg:
       benchmark_hirschberg(align_input,parameters.bandwidth);

tools/align_benchmark/align_benchmark_params.c

@@ -48,7 +48,6 @@ align_bench_params_t parameters = {
   .hew_percentage = 15,
   .hew_threshold = 40,
   .force_scalar = false,
-  .only_score = false,
   // Misc
   .check_display = false,
   .check_correct = false,
@@ -89,7 +88,6 @@ void usage(void) {
       "          --overlap-size INT                                            \n"
       "          --hew-threshold INT                                           \n"
       "          --hew-percentage INT                                          \n"
-      "          --only-score                                                  \n"
       "          --force-scalar                                                \n"
       "        [Misc]                                                          \n"
       "          --check|c 'display'|'correct'|'score'|'alignment'             \n"
@@ -120,7 +118,6 @@ void parse_arguments(
     { "hew-threshold", required_argument, 0, 2003 },
     { "hew-percentage", required_argument, 0, 2004 },
     { "force-scalar", no_argument, 0, 2005 },
-    { "only-score", no_argument, 0, 2006 },
     /* Misc */
     { "check", required_argument, 0, 'c' },
     /* System */
@@ -202,9 +199,6 @@ void parse_arguments(
     case 2005: // --force-scalar
       parameters.force_scalar = true;
       break;
-    case 2006: // --only-score
-      parameters.only_score = true;
-      break;
     /*
      * Misc
      */

tools/align_benchmark/align_benchmark_params.h

@@ -69,7 +69,6 @@ typedef struct {
   int hew_threshold;
   int hew_percentage;
   bool force_scalar;
-  bool only_score;
   // Misc
   bool check_display;
   bool check_correct;